Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.95□□□□□ -1.78
CTSKP43235 AC091903.1-201ENST00000624322 454 ntBASIC3.95□□□□□ -1.78
CTSKP43235 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.95□□□□□ -1.78
CTSKP43235 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTSKP43235 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CTSKP43235 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTSKP43235 SRP72P2-201ENST00000344851 1979 ntBASIC3.94□□□□□ -1.78
CTSKP43235 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.94□□□□□ -1.78
CTSKP43235 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.94□□□□□ -1.78
CTSKP43235 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CTSKP43235 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTSKP43235 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTSKP43235 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTSKP43235 FTLP6-201ENST00000355274 422 ntBASIC3.94□□□□□ -1.78
CTSKP43235 snoU2_19.2-201ENST00000363024 80 ntBASIC3.94□□□□□ -1.78
CTSKP43235 Y_RNA.333-201ENST00000365274 102 ntBASIC3.94□□□□□ -1.78
CTSKP43235 MIR215-201ENST00000384858 110 ntBASIC3.94□□□□□ -1.78
CTSKP43235 MIR7-3-201ENST00000384898 110 ntBASIC3.94□□□□□ -1.78
CTSKP43235 RPL23AP48-201ENST00000406913 488 ntBASIC3.94□□□□□ -1.78
CTSKP43235 AC093578.1-201ENST00000415219 368 ntBASIC3.94□□□□□ -1.78
CTSKP43235 HMGN2P30-201ENST00000423237 256 ntBASIC3.94□□□□□ -1.78
CTSKP43235 MTND5P15-201ENST00000434246 349 ntBASIC3.94□□□□□ -1.78
CTSKP43235 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.94□□□□□ -1.78
CTSKP43235 AL356535.1-201ENST00000440335 398 ntBASIC3.94□□□□□ -1.78
CTSKP43235 AC009296.1-201ENST00000443146 155 ntBASIC3.94□□□□□ -1.78
CTSKP43235 TOMM22P6-201ENST00000465035 409 ntBASIC3.94□□□□□ -1.78
CTSKP43235 AC005921.1-201ENST00000510589 286 ntBASIC3.94□□□□□ -1.78
CTSKP43235 RNU1-103P-201ENST00000516502 125 ntBASIC3.94□□□□□ -1.78
CTSKP43235 RNU5B-3P-201ENST00000516601 115 ntBASIC3.94□□□□□ -1.78
CTSKP43235 RNU7-143P-201ENST00000516781 65 ntBASIC3.94□□□□□ -1.78
CTSKP43235 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.94□□□□□ -1.78
CTSKP43235 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.94□□□□□ -1.78
CTSKP43235 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.94□□□□□ -1.78
CTSKP43235 RMST_6.1-201ENST00000611980 203 ntBASIC3.94□□□□□ -1.78
CTSKP43235 AC241585.2-209ENST00000638217 143 ntBASIC3.94□□□□□ -1.78
CTSKP43235 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTSKP43235 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTSKP43235 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CTSKP43235 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTSKP43235 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.93□□□□□ -1.78
CTSKP43235 RNU6-50P-201ENST00000362356 103 ntBASIC3.93□□□□□ -1.78
CTSKP43235 SNORD115-32-201ENST00000364079 82 ntBASIC3.93□□□□□ -1.78
CTSKP43235 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
CTSKP43235 RNU6-338P-201ENST00000383888 105 ntBASIC3.93□□□□□ -1.78
CTSKP43235 RNU6-17P-201ENST00000384245 107 ntBASIC3.93□□□□□ -1.78
CTSKP43235 RNU6-18P-201ENST00000384527 107 ntBASIC3.93□□□□□ -1.78
CTSKP43235 U8.11-201ENST00000384699 133 ntBASIC3.93□□□□□ -1.78
CTSKP43235 U8.12-201ENST00000384701 133 ntBASIC3.93□□□□□ -1.78
CTSKP43235 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.93□□□□□ -1.78
CTSKP43235 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.93□□□□□ -1.78
CTSKP43235 VDAC1P3-201ENST00000434069 851 ntBASIC3.93□□□□□ -1.78
CTSKP43235 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.93□□□□□ -1.78
CTSKP43235 AL353705.4-201ENST00000449661 238 ntBASIC3.93□□□□□ -1.78
CTSKP43235 U8.18-201ENST00000459285 133 ntBASIC3.93□□□□□ -1.78
CTSKP43235 RPL23AP75-201ENST00000491601 451 ntBASIC3.93□□□□□ -1.78
CTSKP43235 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.93□□□□□ -1.78
CTSKP43235 RNU6-1012P-201ENST00000516606 109 ntBASIC3.93□□□□□ -1.78
CTSKP43235 RNA5SP468-201ENST00000516782 93 ntBASIC3.93□□□□□ -1.78
CTSKP43235 RNA5SP179-201ENST00000517284 121 ntBASIC3.93□□□□□ -1.78
CTSKP43235 AC026403.1-201ENST00000518938 295 ntBASIC3.93□□□□□ -1.78
CTSKP43235 YPEL5P3-201ENST00000547227 352 ntBASIC3.93□□□□□ -1.78
CTSKP43235 RRN3P3-201ENST00000549207 578 ntBASIC3.93□□□□□ -1.78
CTSKP43235 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.93□□□□□ -1.78
CTSKP43235 AC136932.1-201ENST00000574771 208 ntBASIC3.93□□□□□ -1.78
CTSKP43235 AC240442.1-201ENST00000616055 283 ntBASIC3.93□□□□□ -1.78
CTSKP43235 U2.21-201ENST00000637295 81 ntBASIC3.93□□□□□ -1.78
CTSKP43235 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTSKP43235 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTSKP43235 USP8P1-201ENST00000494673 3183 ntBASIC3.92□□□□□ -1.78
CTSKP43235 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.92□□□□□ -1.78
CTSKP43235 RNU6-600P-201ENST00000362524 99 ntBASIC3.92□□□□□ -1.78
CTSKP43235 Y_RNA.143-201ENST00000363520 106 ntBASIC3.92□□□□□ -1.78
CTSKP43235 SNORD35B-201ENST00000363660 87 ntBASIC3.92□□□□□ -1.78
CTSKP43235 Z98749.2-208ENST00000381646 500 ntBASIC3.92□□□□□ -1.78
CTSKP43235 RNU6-1286P-201ENST00000383871 107 ntBASIC3.92□□□□□ -1.78
CTSKP43235 RNU1-89P-201ENST00000384592 164 ntBASIC3.92□□□□□ -1.78
CTSKP43235 MIR518D-201ENST00000385014 87 ntBASIC3.92□□□□□ -1.78
CTSKP43235 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CTSKP43235 MIR708-201ENST00000390708 88 ntBASIC3.92□□□□□ -1.78
CTSKP43235 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.92□□□□□ -1.78
CTSKP43235 SNORA3C-201ENST00000408792 125 ntBASIC3.92□□□□□ -1.78
CTSKP43235 RNU4-61P-201ENST00000411243 107 ntBASIC3.92□□□□□ -1.78
CTSKP43235 Z82188.1-201ENST00000436709 154 ntBASIC3.92□□□□□ -1.78
CTSKP43235 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.92□□□□□ -1.78
CTSKP43235 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.92□□□□□ -1.78
CTSKP43235 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.92□□□□□ -1.78
CTSKP43235 GZMAP1-201ENST00000503054 631 ntBASIC3.92□□□□□ -1.78
CTSKP43235 RNU4-71P-201ENST00000516258 113 ntBASIC3.92□□□□□ -1.78
CTSKP43235 RNU1-95P-201ENST00000516357 160 ntBASIC3.92□□□□□ -1.78
CTSKP43235 RNU1-128P-201ENST00000516704 160 ntBASIC3.92□□□□□ -1.78
CTSKP43235 RN7SKP272-201ENST00000516988 232 ntBASIC3.92□□□□□ -1.78
CTSKP43235 DEFB108E-201ENST00000524692 240 ntBASIC3.92□□□□□ -1.78
CTSKP43235 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.92□□□□□ -1.78
CTSKP43235 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CTSKP43235 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.92□□□□□ -1.78
CTSKP43235 H3F3AP1-201ENST00000559984 334 ntBASIC3.92□□□□□ -1.78
CTSKP43235 AC091167.4-201ENST00000605079 184 ntBASIC3.92□□□□□ -1.78
CTSKP43235 AL356157.2-201ENST00000605122 111 ntBASIC3.92□□□□□ -1.78
CTSKP43235 RPL23AP88-201ENST00000605759 454 ntBASIC3.92□□□□□ -1.78
CTSKP43235 BX284668.6-201ENST00000606899 438 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms