Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 uc_338.13-201ENST00000618243 179 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NFKB1P19838 Z73965.1-201ENST00000623412 2297 ntBASIC4.4□□□□□ -1.71
NFKB1P19838 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.4□□□□□ -1.71
NFKB1P19838 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NFKB1P19838 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
NFKB1P19838 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NFKB1P19838 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NFKB1P19838 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NFKB1P19838 AC110491.1-201ENST00000562191 2010 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NFKB1P19838 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NFKB1P19838 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NFKB1P19838 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NFKB1P19838 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NFKB1P19838 AC010733.2-201ENST00000589496 5702 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.39□□□□□ -1.71
NFKB1P19838 FTLP6-201ENST00000355274 422 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 RNU1-94P-201ENST00000362627 173 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 SNORD56.1-201ENST00000362913 68 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 RNU4-80P-201ENST00000363200 141 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 RNU6-312P-201ENST00000364629 107 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 MIR124-3-201ENST00000384866 87 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 Y_RNA.586-201ENST00000391146 98 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.39□□□□□ -1.71
NFKB1P19838 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.39□□□□□ -1.71
NFKB1P19838 GPM6BP3-201ENST00000442797 145 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 AC010095.1-201ENST00000443543 144 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 PHBP16-201ENST00000446318 950 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 RN7SL98P-201ENST00000462271 300 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 RPS4XP22-201ENST00000480755 780 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 AC016632.1-201ENST00000503994 196 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.39□□□□□ -1.71
NFKB1P19838 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.39□□□□□ -1.71
NFKB1P19838 HSPE1P4-201ENST00000550617 308 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.39□□□□□ -1.71
NFKB1P19838 AC019159.1-201ENST00000605094 187 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 AL365222.1-201ENST00000614661 98 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 RN7SL722P-201ENST00000617780 284 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 RN7SL565P-201ENST00000618246 284 ntBASIC4.39□□□□□ -1.71
NFKB1P19838 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.39□□□□□ -1.71
NFKB1P19838 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NFKB1P19838 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.39□□□□□ -1.71
NFKB1P19838 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NFKB1P19838 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.39□□□□□ -1.71
NFKB1P19838 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NFKB1P19838 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NFKB1P19838 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NFKB1P19838 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NFKB1P19838 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NFKB1P19838 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.38□□□□□ -1.71
NFKB1P19838 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NFKB1P19838 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.38□□□□□ -1.71
NFKB1P19838 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.38□□□□□ -1.71
NFKB1P19838 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.38□□□□□ -1.71
NFKB1P19838 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.38□□□□□ -1.71
NFKB1P19838 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.38□□□□□ -1.71
NFKB1P19838 Y_RNA.7-201ENST00000362352 102 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 RNU6-778P-201ENST00000363269 103 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 RNA5SP447-201ENST00000363749 119 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 RNU6-873P-201ENST00000363833 107 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 Y_RNA.215-201ENST00000364204 112 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 RNU6-1141P-201ENST00000364520 107 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 SNORA72.2-201ENST00000365028 127 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.38□□□□□ -1.71
NFKB1P19838 SNORA56-201ENST00000383966 129 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 SNORA40.19-201ENST00000390846 128 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 SNORA11F-201ENST00000408237 128 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 RN7SKP61-201ENST00000410642 295 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 Y_RNA.629-201ENST00000411368 105 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 RPL26P27-201ENST00000414397 437 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 AC138623.1-201ENST00000418060 216 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.38□□□□□ -1.71
NFKB1P19838 IFNA11P-201ENST00000446352 526 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 SNORD108-201ENST00000459332 71 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 AC005840.1-201ENST00000498412 377 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 RNU6-966P-201ENST00000516479 104 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 SUMO2P18-201ENST00000518873 252 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.38□□□□□ -1.71
NFKB1P19838 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.38□□□□□ -1.71
NFKB1P19838 MTND6P33-201ENST00000571794 183 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 AC010999.1-201ENST00000611856 324 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 AC140479.6-201ENST00000633535 357 ntBASIC4.38□□□□□ -1.71
NFKB1P19838 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NFKB1P19838 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.38□□□□□ -1.71
NFKB1P19838 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
NFKB1P19838 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.38□□□□□ -1.71
NFKB1P19838 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NFKB1P19838 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.37□□□□□ -1.71
NFKB1P19838 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NFKB1P19838 Y_RNA.23-201ENST00000362496 106 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 RNU6-1272P-201ENST00000362776 107 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 RNA5SP28-201ENST00000363841 119 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 SNORA36A-201ENST00000384221 132 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 MIR325-201ENST00000385260 98 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 AC074117.2-201ENST00000417130 397 ntBASIC4.37□□□□□ -1.71
NFKB1P19838 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.37□□□□□ -1.71
NFKB1P19838 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.37□□□□□ -1.71
NFKB1P19838 snoU13.1-201ENST00000459157 104 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 236.3 ms