Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC008945.2-201ENST00000606056 604 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AC022893.3-201ENST00000607665 437 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AL355073.2-201ENST00000612106 557 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AP001486.3-201ENST00000615334 372 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AL354950.2-201ENST00000617939 290 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 YWHAEP7-203ENST00000622054 312 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AL031601.2-202ENST00000622650 282 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AC005609.4-201ENST00000625071 447 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AC024614.3-201ENST00000637860 256 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.22□□□□□ -2.05
HDAC3O15379 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.22□□□□□ -2.05
HDAC3O15379 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
HDAC3O15379 AL354685.2-201ENST00000448218 1447 ntBASIC2.22□□□□□ -2.05
HDAC3O15379 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.21□□□□□ -2.06
HDAC3O15379 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
HDAC3O15379 RNU6-1035P-201ENST00000384477 107 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 Y_RNA.510-201ENST00000384511 114 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 CISD1P1-201ENST00000393907 327 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 Y_RNA.604-201ENST00000410574 102 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 RPS12P24-201ENST00000412619 387 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 AL109913.1-201ENST00000421173 514 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 AL356867.1-201ENST00000429623 299 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.21□□□□□ -2.06
HDAC3O15379 AL591212.2-201ENST00000433923 257 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 Z82210.1-201ENST00000440037 231 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.21□□□□□ -2.06
HDAC3O15379 FABP5P13-201ENST00000452144 328 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 AC022364.2-201ENST00000457963 554 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.21□□□□□ -2.06
HDAC3O15379 AC023141.11-201ENST00000508864 202 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.21□□□□□ -2.06
HDAC3O15379 RN7SKP219-201ENST00000516825 296 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 RNU6-685P-201ENST00000517088 95 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 AC022634.1-201ENST00000520765 532 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.21□□□□□ -2.06
HDAC3O15379 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.21□□□□□ -2.06
HDAC3O15379 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.21□□□□□ -2.06
HDAC3O15379 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.21□□□□□ -2.06
HDAC3O15379 HIF1AP1-201ENST00000553642 175 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.21□□□□□ -2.06
HDAC3O15379 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.21□□□□□ -2.06
HDAC3O15379 MIR4703-201ENST00000577728 79 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 AL162413.1-201ENST00000603198 110 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 AC104763.2-201ENST00000604179 382 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 ZNF658B-202ENST00000615961 3375 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 FER-210ENST00000628534 558 ntTSL 5 BASIC2.21□□□□□ -2.06
HDAC3O15379 HSPA8P4-201ENST00000511877 1920 ntBASIC2.21□□□□□ -2.06
HDAC3O15379 MTND5P17-201ENST00000418405 1603 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HDAC3O15379 AC103710.2-202ENST00000641454 2853 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HDAC3O15379 Y_RNA.88-201ENST00000363029 99 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 Y_RNA.111-201ENST00000363248 100 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 RNY3P3-201ENST00000363816 102 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 RNU6-270P-201ENST00000364131 105 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 SNORA75B-201ENST00000384053 137 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 RNU6-550P-201ENST00000391057 101 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HDAC3O15379 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HDAC3O15379 RNA5SP184-201ENST00000411071 108 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 OR9R1P-201ENST00000412200 877 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 EEF1A1P40-201ENST00000412883 573 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.2□□□□□ -2.06
HDAC3O15379 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.2□□□□□ -2.06
HDAC3O15379 NUP35P1-201ENST00000422734 947 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 AL512844.2-201ENST00000433990 593 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 AC018634.1-201ENST00000437554 401 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 AL353572.1-201ENST00000442490 417 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 FABP5P15-201ENST00000453566 214 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 RNU7-182P-201ENST00000459009 62 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 RNA5SP233-201ENST00000459153 113 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 RNU6-261P-201ENST00000459506 102 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 AC022493.1-201ENST00000492984 337 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 AC234781.5-201ENST00000508429 271 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 RNA5SP24-201ENST00000516478 95 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 RNU6-914P-201ENST00000516749 109 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 RNU6-677P-201ENST00000516914 101 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 RNA5SP503-201ENST00000517047 117 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.2□□□□□ -2.06
HDAC3O15379 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.2□□□□□ -2.06
HDAC3O15379 AC006023.1-201ENST00000603944 259 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 AC136601.2-201ENST00000604356 474 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 AL158032.1-201ENST00000605401 106 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 SNORD14A-201ENST00000606526 91 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 MIR15A-201ENST00000607334 83 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 AC024940.5-201ENST00000622889 474 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 MIR3662-201ENST00000637030 95 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HDAC3O15379 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
HDAC3O15379 AC010329.5-201ENST00000623497 2174 ntBASIC2.2□□□□□ -2.06
HDAC3O15379 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HDAC3O15379 AL049641.1-201ENST00000441055 1948 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HDAC3O15379 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.19□□□□□ -2.06
HDAC3O15379 RNU6-552P-201ENST00000362869 119 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 RNA5SP37-201ENST00000365420 130 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 RNU6-996P-201ENST00000365438 107 ntBASIC2.19□□□□□ -2.06
HDAC3O15379 RNU4-20P-201ENST00000365601 151 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 240.1 ms