Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc30Q8BVF4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc30Q8BVF4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc30Q8BVF4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.89■□□□□ 0.93
Ccdc30Q8BVF4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc30Q8BVF4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc30Q8BVF4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc30Q8BVF4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc30Q8BVF4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Gm27742-201ENSMUST00000184667 60 ntBASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc30Q8BVF4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc30Q8BVF4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc30Q8BVF4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc30Q8BVF4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc30Q8BVF4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.87■□□□□ 0.93
Ccdc30Q8BVF4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc30Q8BVF4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc30Q8BVF4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc30Q8BVF4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc30Q8BVF4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Gm27704-201ENSMUST00000185094 107 ntBASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Gm33142-201ENSMUST00000193913 867 ntBASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc30Q8BVF4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc30Q8BVF4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Gm7284-201ENSMUST00000131667 944 ntBASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc30Q8BVF4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc30Q8BVF4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc30Q8BVF4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Ccdc30Q8BVF4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc30Q8BVF4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc30Q8BVF4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc30Q8BVF4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc30Q8BVF4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc30Q8BVF4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc30Q8BVF4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms