Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.22□□□□□ -1.89
SNHG28P0DPA3 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.22□□□□□ -1.89
SNHG28P0DPA3 MIR4319-201ENST00000577285 85 ntBASIC3.22□□□□□ -1.89
SNHG28P0DPA3 AL512605.2-201ENST00000592972 256 ntBASIC3.22□□□□□ -1.89
SNHG28P0DPA3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.22□□□□□ -1.89
SNHG28P0DPA3 ZNF826P-207ENST00000622273 1910 ntBASIC3.22□□□□□ -1.89
SNHG28P0DPA3 ZNF33CP-201ENST00000432492 2030 ntBASIC3.22□□□□□ -1.89
SNHG28P0DPA3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.21□□□□□ -1.89
SNHG28P0DPA3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 RNU6-989P-201ENST00000362756 107 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 Y_RNA.307-201ENST00000365022 117 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 Y_RNA.455-201ENST00000384230 98 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 RNU6-306P-201ENST00000384617 107 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 SNORA75.6-201ENST00000391318 127 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 RPL7P10-201ENST00000417407 739 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 AC008267.5-201ENST00000424928 265 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 VDAC1P3-201ENST00000434069 851 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 SUMO1P3-201ENST00000439961 304 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 HMGB1P25-201ENST00000468402 607 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 AC128713.1-201ENST00000471495 306 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 AC090525.1-201ENST00000479116 478 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 AC068781.1-201ENST00000488231 618 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 AC078817.1-201ENST00000492623 435 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 AC009901.1-201ENST00000506703 541 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 RNU6-470P-201ENST00000515954 104 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 RNU6-1016P-201ENST00000516689 94 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 MTCO3P23-201ENST00000561363 289 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.21□□□□□ -1.9
SNHG28P0DPA3 MIR3162-201ENST00000581818 82 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
SNHG28P0DPA3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.21□□□□□ -1.9
SNHG28P0DPA3 SNORD58B-201ENST00000607313 66 ntBASIC3.21□□□□□ -1.9
SNHG28P0DPA3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.21□□□□□ -1.9
SNHG28P0DPA3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.21□□□□□ -1.9
SNHG28P0DPA3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 MIR26A1-201ENST00000362205 77 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 RNU6-562P-201ENST00000362731 107 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 Y_RNA.176-201ENST00000363815 109 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 RNU6-1078P-201ENST00000364522 103 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AC117470.1-201ENST00000381974 330 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 RNU6-946P-201ENST00000383878 107 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 RNU6-95P-201ENST00000384697 107 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 EI24P2-201ENST00000397776 1076 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 HSPE1P26-201ENST00000405341 275 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 RNU4-46P-201ENST00000410818 138 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AC092447.6-201ENST00000414578 210 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AL139396.1-201ENST00000421137 167 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 MRPS18CP6-201ENST00000423587 223 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AC236972.1-201ENST00000433225 199 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AC112220.1-201ENST00000434628 355 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 RPL21P2-201ENST00000440049 481 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 CHEK2P4-201ENST00000450340 246 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 CECR9-201ENST00000453421 199 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 RPL21P8-201ENST00000465083 535 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AC116337.1-201ENST00000509680 687 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 RNU6-1332P-201ENST00000516666 104 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 Y_RNA.721-201ENST00000517207 102 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 MYL12BP1-201ENST00000569826 507 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 NF1P5-201ENST00000588287 448 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AC018462.2-201ENST00000605375 395 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AL365434.2-201ENST00000607979 234 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AC011890.2-201ENST00000613393 294 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 MIR6852-201ENST00000621699 66 ntBASIC3.2□□□□□ -1.9
SNHG28P0DPA3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SNHG28P0DPA3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNHG28P0DPA3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNHG28P0DPA3 SNORD3E-201ENST00000362899 217 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 SNORA23-201ENST00000365128 182 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 Y_RNA.396-201ENST00000383949 103 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 MIR181A2-201ENST00000384863 110 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 Y_RNA.618-201ENST00000410949 107 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 AC092809.3-201ENST00000415453 231 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 PSMA2P3-201ENST00000429685 675 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 USP9YP30-201ENST00000430729 455 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 RPL36AP6-201ENST00000435770 321 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 MTND2P29-201ENST00000438595 412 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.19□□□□□ -1.9
SNHG28P0DPA3 PCNPP5-201ENST00000452246 481 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 AL109933.2-201ENST00000452651 260 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.19□□□□□ -1.9
SNHG28P0DPA3 RNU2-69P-201ENST00000516061 100 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 SNORA14.1-201ENST00000516113 141 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 SCARNA16.2-201ENST00000516520 172 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 RNU4-77P-201ENST00000516692 156 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNHG28P0DPA3 SETP7-201ENST00000552169 453 ntBASIC3.19□□□□□ -1.9
SNHG28P0DPA3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.19□□□□□ -1.9
SNHG28P0DPA3 AC006023.1-201ENST00000603944 259 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 222.7 ms