Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.8□□□□□ -1.8
KLF4O43474 IGKV2-38-201ENST00000517443 247 ntBASIC3.8□□□□□ -1.8
KLF4O43474 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.8□□□□□ -1.8
KLF4O43474 IGKV2-23-201ENST00000518729 323 ntBASIC3.8□□□□□ -1.8
KLF4O43474 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.8□□□□□ -1.8
KLF4O43474 MIR5188-201ENST00000583467 113 ntBASIC3.8□□□□□ -1.8
KLF4O43474 AC104695.3-201ENST00000604052 296 ntBASIC3.8□□□□□ -1.8
KLF4O43474 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.8□□□□□ -1.8
KLF4O43474 ZYXP1-201ENST00000617638 118 ntBASIC3.8□□□□□ -1.8
KLF4O43474 RNA5SP196-201ENST00000625967 102 ntBASIC3.8□□□□□ -1.8
KLF4O43474 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.8□□□□□ -1.8
KLF4O43474 MIR492-201ENST00000638676 116 ntBASIC3.8□□□□□ -1.8
KLF4O43474 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.8□□□□□ -1.8
KLF4O43474 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
KLF4O43474 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.8□□□□□ -1.8
KLF4O43474 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
KLF4O43474 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KLF4O43474 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.8□□□□□ -1.8
KLF4O43474 AC018555.1-201ENST00000567548 1980 ntBASIC3.8□□□□□ -1.8
KLF4O43474 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.8□□□□□ -1.8
KLF4O43474 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KLF4O43474 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KLF4O43474 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
KLF4O43474 AP001486.2-201ENST00000561652 5113 ntBASIC3.79□□□□□ -1.8
KLF4O43474 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KLF4O43474 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
KLF4O43474 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KLF4O43474 MIR383-201ENST00000362257 73 ntBASIC3.79□□□□□ -1.8
KLF4O43474 RNU1-14P-201ENST00000362759 152 ntBASIC3.79□□□□□ -1.8
KLF4O43474 SNORA63.7-201ENST00000365579 123 ntBASIC3.79□□□□□ -1.8
KLF4O43474 Y_RNA.485-201ENST00000384395 102 ntBASIC3.79□□□□□ -1.8
KLF4O43474 AL356057.3-201ENST00000402607 340 ntBASIC3.79□□□□□ -1.8
KLF4O43474 AL590135.1-201ENST00000422215 156 ntBASIC3.79□□□□□ -1.8
KLF4O43474 AC019205.3-201ENST00000424573 156 ntBASIC3.79□□□□□ -1.8
KLF4O43474 OR4C10P-201ENST00000434991 931 ntBASIC3.79□□□□□ -1.8
KLF4O43474 AC004383.1-201ENST00000438135 289 ntBASIC3.79□□□□□ -1.8
KLF4O43474 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.79□□□□□ -1.8
KLF4O43474 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.79□□□□□ -1.8
KLF4O43474 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.79□□□□□ -1.8
KLF4O43474 AC016700.2-201ENST00000446011 156 ntBASIC3.79□□□□□ -1.8
KLF4O43474 RPS29P19-201ENST00000479709 171 ntBASIC3.79□□□□□ -1.8
KLF4O43474 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.79□□□□□ -1.8
KLF4O43474 ANXA2P1-201ENST00000505539 926 ntBASIC3.79□□□□□ -1.8
KLF4O43474 AC008958.1-201ENST00000511047 682 ntBASIC3.79□□□□□ -1.8
KLF4O43474 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.79□□□□□ -1.8
KLF4O43474 AC107294.3-201ENST00000609211 526 ntBASIC3.79□□□□□ -1.8
KLF4O43474 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KLF4O43474 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KLF4O43474 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.79□□□□□ -1.8
KLF4O43474 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KLF4O43474 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KLF4O43474 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KLF4O43474 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
KLF4O43474 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
KLF4O43474 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KLF4O43474 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KLF4O43474 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KLF4O43474 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
KLF4O43474 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.78□□□□□ -1.8
KLF4O43474 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
KLF4O43474 RNU5B-2P-201ENST00000363036 113 ntBASIC3.78□□□□□ -1.8
KLF4O43474 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.78□□□□□ -1.8
KLF4O43474 RNU6-1285P-201ENST00000363480 105 ntBASIC3.78□□□□□ -1.8
KLF4O43474 RNY3P11-201ENST00000364153 102 ntBASIC3.78□□□□□ -1.8
KLF4O43474 RNU4-50P-201ENST00000364361 141 ntBASIC3.78□□□□□ -1.8
KLF4O43474 Y_RNA.645-201ENST00000391229 102 ntBASIC3.78□□□□□ -1.8
KLF4O43474 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KLF4O43474 RNA5SP317-201ENST00000410176 116 ntBASIC3.78□□□□□ -1.8
KLF4O43474 RNA5SP311-201ENST00000411290 116 ntBASIC3.78□□□□□ -1.8
KLF4O43474 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.78□□□□□ -1.8
KLF4O43474 RPS3AP12-201ENST00000443616 753 ntBASIC3.78□□□□□ -1.8
KLF4O43474 AP001324.2-201ENST00000461163 319 ntBASIC3.78□□□□□ -1.8
KLF4O43474 TOMM22P6-201ENST00000465035 409 ntBASIC3.78□□□□□ -1.8
KLF4O43474 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.78□□□□□ -1.8
KLF4O43474 RPL36AP48-201ENST00000485521 314 ntBASIC3.78□□□□□ -1.8
KLF4O43474 RPL31P61-201ENST00000496160 376 ntBASIC3.78□□□□□ -1.8
KLF4O43474 AIG1P1-201ENST00000503376 148 ntBASIC3.78□□□□□ -1.8
KLF4O43474 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
KLF4O43474 AC026726.1-201ENST00000512859 601 ntBASIC3.78□□□□□ -1.8
KLF4O43474 AC026402.1-201ENST00000513642 170 ntBASIC3.78□□□□□ -1.8
KLF4O43474 RNA5SP315-201ENST00000516340 116 ntBASIC3.78□□□□□ -1.8
KLF4O43474 RNA5SP49-201ENST00000516450 115 ntBASIC3.78□□□□□ -1.8
KLF4O43474 RNA5SP312-201ENST00000517068 116 ntBASIC3.78□□□□□ -1.8
KLF4O43474 MIR2116-201ENST00000517221 80 ntBASIC3.78□□□□□ -1.8
KLF4O43474 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.78□□□□□ -1.8
KLF4O43474 AC040926.1-201ENST00000530195 238 ntBASIC3.78□□□□□ -1.8
KLF4O43474 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.78□□□□□ -1.8
KLF4O43474 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.78□□□□□ -1.8
KLF4O43474 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.78□□□□□ -1.8
KLF4O43474 VN1R85P-201ENST00000601587 426 ntBASIC3.78□□□□□ -1.8
KLF4O43474 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.78□□□□□ -1.8
KLF4O43474 MIR8059-201ENST00000620427 81 ntBASIC3.78□□□□□ -1.8
KLF4O43474 UCA1.1-201ENST00000620952 75 ntBASIC3.78□□□□□ -1.8
KLF4O43474 AC138305.3-201ENST00000624988 240 ntBASIC3.78□□□□□ -1.8
KLF4O43474 SNORA43.4-201ENST00000629559 138 ntBASIC3.78□□□□□ -1.8
KLF4O43474 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
KLF4O43474 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
KLF4O43474 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.78□□□□□ -1.8
KLF4O43474 AC073073.2-201ENST00000609827 2578 ntBASIC3.78□□□□□ -1.8
KLF4O43474 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms