Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 ATG12P2-201ENST00000456830 416 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.72□□□□□ -2.13
SCN4AP35499 MRPS17P3-201ENST00000465453 385 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
SCN4AP35499 AC022447.1-201ENST00000515358 464 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 SNORA31.3-201ENST00000516029 96 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
SCN4AP35499 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN4AP35499 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.72□□□□□ -2.13
SCN4AP35499 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.72□□□□□ -2.13
SCN4AP35499 AC109446.2-201ENST00000567872 497 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 MTATP6P3-201ENST00000581686 676 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 AL358072.1-201ENST00000604156 575 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 AC105148.1-201ENST00000604961 409 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.72□□□□□ -2.13
SCN4AP35499 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SCN4AP35499 uc_338.14-201ENST00000613162 166 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 AC098657.3-201ENST00000620434 263 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 UCA1.1-201ENST00000620952 75 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN4AP35499 MTND4P27-201ENST00000450813 1354 ntBASIC1.72□□□□□ -2.13
SCN4AP35499 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.71□□□□□ -2.13
SCN4AP35499 NACAP2-201ENST00000318548 624 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 RNU6-500P-201ENST00000362349 107 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 RNU6-778P-201ENST00000363269 103 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 MIR627-201ENST00000384979 97 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 MIR524-201ENST00000385242 87 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 NDUFS5P4-201ENST00000412983 318 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 RPS6P15-201ENST00000431996 751 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 GPM6BP2-201ENST00000432046 144 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 GPM6BP1-201ENST00000446387 144 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN4AP35499 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN4AP35499 RPS29P1-201ENST00000465274 159 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 AL049874.1-201ENST00000489560 388 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 RNU6-572P-201ENST00000516724 80 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 CR383656.8-201ENST00000549046 145 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.71□□□□□ -2.14
SCN4AP35499 ROCK1P1-201ENST00000573767 549 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN4AP35499 MIR4307-201ENST00000582802 84 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.71□□□□□ -2.14
SCN4AP35499 AC126118.1-201ENST00000607744 628 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.71□□□□□ -2.14
SCN4AP35499 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SCN4AP35499 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN4AP35499 HMGN2P19-201ENST00000425149 265 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 CALM1P1-201ENST00000442082 433 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 BRK1P2-201ENST00000442875 223 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.7□□□□□ -2.14
SCN4AP35499 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.7□□□□□ -2.14
SCN4AP35499 RN7SKP287-201ENST00000516546 266 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 RNU5B-3P-201ENST00000516601 115 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN4AP35499 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN4AP35499 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.7□□□□□ -2.14
SCN4AP35499 NUTF2P8-201ENST00000604593 363 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AC097468.3-201ENST00000607956 456 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AC087683.2-201ENST00000611384 326 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AL365204.3-201ENST00000612448 685 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AC091931.1-201ENST00000623488 728 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SCN4AP35499 CR848007.1-201ENST00000442354 1699 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SCN4AP35499 RNU6-501P-201ENST00000364072 100 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 SNORA68.1-201ENST00000364537 132 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 RNU6-1280P-201ENST00000365211 107 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 MIR17-201ENST00000385012 84 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 SRIP3-201ENST00000413200 219 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AC098592.1-201ENST00000419352 333 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 MTND2P18-201ENST00000419962 1030 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AC007919.1-201ENST00000429380 217 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.7□□□□□ -2.14
SCN4AP35499 MTND1P3-201ENST00000484956 952 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 HMGB3P17-201ENST00000504195 649 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 NDUFB4P2-201ENST00000509515 391 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 RN7SKP49-201ENST00000516675 260 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 RNU6-703P-201ENST00000516946 107 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.7□□□□□ -2.14
SCN4AP35499 AP004607.1-201ENST00000524456 203 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.7□□□□□ -2.14
SCN4AP35499 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.7□□□□□ -2.14
SCN4AP35499 MIR3616-201ENST00000584070 92 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AL359547.2-201ENST00000615810 418 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.7□□□□□ -2.14
SCN4AP35499 FRG1KP-201ENST00000623592 341 ntBASIC1.7□□□□□ -2.14
SCN4AP35499 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SCN4AP35499 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SCN4AP35499 AC110491.1-201ENST00000562191 2010 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.69□□□□□ -2.14
SCN4AP35499 RNA5SP240-201ENST00000365355 128 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 SNORA4.3-201ENST00000365564 137 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SCN4AP35499 RNU6-1080P-201ENST00000383982 107 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 MRPL42P2-201ENST00000403169 426 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 MIR548J-201ENST00000408833 112 ntBASIC1.69□□□□□ -2.14
SCN4AP35499 RNU2-33P-201ENST00000410344 192 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms