Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RPL23AP26-201ENST00000412728 464 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHS1O60500 CYCSP32-201ENST00000440548 321 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHS1O60500 AL513124.1-201ENST00000450410 614 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.84□□□□□ -1.79
NPHS1O60500 RPS29P33-201ENST00000456717 146 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 AC091144.1-201ENST00000519573 138 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 AP004607.1-201ENST00000524456 203 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.84□□□□□ -1.79
NPHS1O60500 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.84□□□□□ -1.79
NPHS1O60500 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHS1O60500 MIR5096-201ENST00000583713 70 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 AC012433.1-201ENST00000588916 398 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.84□□□□□ -1.79
NPHS1O60500 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.84□□□□□ -1.79
NPHS1O60500 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHS1O60500 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.84□□□□□ -1.79
NPHS1O60500 MIR8059-201ENST00000620427 81 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 MIR3653-201ENST00000625572 110 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.84□□□□□ -1.79
NPHS1O60500 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPHS1O60500 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
NPHS1O60500 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.8
NPHS1O60500 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NPHS1O60500 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NPHS1O60500 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
NPHS1O60500 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.83□□□□□ -1.8
NPHS1O60500 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPHS1O60500 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPHS1O60500 Y_RNA.84-201ENST00000363011 104 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPHS1O60500 MIR215-201ENST00000384858 110 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 HSPE1P26-201ENST00000405341 275 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 PPIAP31-201ENST00000405422 495 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 RNA5SP129-201ENST00000410276 118 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 RNU6-1203P-201ENST00000410703 110 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.83□□□□□ -1.8
NPHS1O60500 AL358453.1-201ENST00000422522 250 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 AC091286.1-201ENST00000431233 461 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 MTATP6P7-201ENST00000453315 681 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 RPL21P104-201ENST00000464143 478 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 RN7SL738P-201ENST00000470264 297 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 AC091167.1-201ENST00000492017 396 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 AL132838.2-201ENST00000492041 314 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 HMGB1P35-201ENST00000503360 598 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 AP002770.2-201ENST00000543613 532 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 SYF2P1-201ENST00000550658 413 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 ZNF192P1-203ENST00000565888 810 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 MIR4330-201ENST00000579077 105 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 MIR3690-201ENST00000580266 75 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.83□□□□□ -1.8
NPHS1O60500 AC025946.2-201ENST00000603398 234 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 BRDTP1-201ENST00000605735 677 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.83□□□□□ -1.8
NPHS1O60500 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.83□□□□□ -1.8
NPHS1O60500 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
NPHS1O60500 AC233981.2-201ENST00000611524 1614 ntBASIC3.83□□□□□ -1.8
NPHS1O60500 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NPHS1O60500 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPHS1O60500 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPHS1O60500 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.82□□□□□ -1.8
NPHS1O60500 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.82□□□□□ -1.8
NPHS1O60500 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.82□□□□□ -1.8
NPHS1O60500 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPHS1O60500 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPHS1O60500 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NPHS1O60500 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.82□□□□□ -1.8
NPHS1O60500 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.82□□□□□ -1.8
NPHS1O60500 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPHS1O60500 RNU6-50P-201ENST00000362356 103 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 RNU1-73P-201ENST00000383971 164 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 RNU2-25P-201ENST00000411041 191 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.82□□□□□ -1.8
NPHS1O60500 AC139712.2-201ENST00000424302 339 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 SDAD1P3-201ENST00000427380 333 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 RPL21P40-201ENST00000428586 483 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 AC124916.1-201ENST00000444020 547 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 UQCRHP4-201ENST00000471686 272 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 HMGB3P17-201ENST00000504195 649 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 ANXA2P1-201ENST00000505539 926 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 RN7SKP272-201ENST00000516988 232 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPHS1O60500 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.82□□□□□ -1.8
NPHS1O60500 AC010928.2-201ENST00000588017 287 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 AC114781.5-201ENST00000615297 108 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 AP001282.2-201ENST00000616149 309 ntBASIC3.82□□□□□ -1.8
NPHS1O60500 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.82□□□□□ -1.8
NPHS1O60500 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.82□□□□□ -1.8
NPHS1O60500 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NPHS1O60500 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NPHS1O60500 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NPHS1O60500 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NPHS1O60500 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPHS1O60500 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NPHS1O60500 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NPHS1O60500 MAPK10-372ENST00000641954 3413 ntBASIC3.81□□□□□ -1.8
NPHS1O60500 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NPHS1O60500 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms