Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SNORA40.19-201ENST00000390846 128 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 U3.22-201ENST00000391120 215 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 RNU6-131P-201ENST00000391144 107 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 RNU6-735P-201ENST00000410612 107 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 NDUFS5P4-201ENST00000412983 318 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 AC004975.1-201ENST00000428733 208 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 AC022795.1-201ENST00000473808 480 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 AC078918.1-201ENST00000498515 228 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 AC091868.1-201ENST00000508746 304 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 RNU6-313P-201ENST00000516317 112 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 SUMO2P18-201ENST00000518873 252 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 MIR3145-201ENST00000580727 82 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 MIR3936-201ENST00000584304 110 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 AL008718.3-201ENST00000610217 321 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 AL021997.2-201ENST00000615674 271 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 AC006971.1-201ENST00000407916 4486 ntBASIC4.82□□□□□ -1.64
PCDHB9Q9Y5E1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 AC092593.1-201ENST00000515413 1815 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 RNU6-1272P-201ENST00000362776 107 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 RNA5SP515-201ENST00000364570 118 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 RNU1-82P-201ENST00000390851 165 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 AC012306.1-201ENST00000423267 114 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 RAB28P5-201ENST00000427490 651 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 FTH1P6-201ENST00000430768 320 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 AL162725.1-201ENST00000435405 301 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 AC016831.4-201ENST00000438302 307 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 IFNA11P-201ENST00000446352 526 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 AC011276.1-201ENST00000469688 323 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 SCARNA22-201ENST00000503991 125 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 RNU1-6P-201ENST00000516290 144 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 RN7SL690P-201ENST00000582087 240 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 RPL7P50-201ENST00000600588 727 ntBASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
PCDHB9Q9Y5E1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 AL590240.1-201ENST00000334118 313 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 Y_RNA.7-201ENST00000362352 102 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 RNU6-1285P-201ENST00000363480 105 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 Y_RNA.179-201ENST00000363844 90 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 RNU6-312P-201ENST00000364629 107 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 Y_RNA.488-201ENST00000384403 102 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 RNU6-417P-201ENST00000384712 107 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 RNU6-1154P-201ENST00000391001 104 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 EIF4HP2-201ENST00000424380 563 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 AL121594.1-201ENST00000475906 575 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 RPS27AP10-201ENST00000496103 208 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 AC009163.5-201ENST00000575421 637 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 AL451007.1-201ENST00000595491 289 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 AC015914.2-201ENST00000618167 288 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 AC091895.1-201ENST00000624494 256 ntBASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PCDHB9Q9Y5E1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 323.1 ms