Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.59□□□□□ -1.83
PNKPQ96T60 RNA5SP290-201ENST00000517133 127 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 RNA5SP380-201ENST00000517190 98 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PNKPQ96T60 AL049641.1-201ENST00000441055 1948 ntBASIC3.59□□□□□ -1.83
PNKPQ96T60 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PNKPQ96T60 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.59□□□□□ -1.84
PNKPQ96T60 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PNKPQ96T60 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PNKPQ96T60 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
PNKPQ96T60 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
PNKPQ96T60 Y_RNA.5-201ENST00000362334 102 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 RNU6-1115P-201ENST00000362490 106 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 RNU6-600P-201ENST00000362524 99 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 Y_RNA.28-201ENST00000362554 111 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 Y_RNA.112-201ENST00000363250 102 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 Y_RNA.151-201ENST00000363566 112 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 RNU6-395P-201ENST00000365662 106 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PNKPQ96T60 RNA5SP239-201ENST00000410218 129 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 Z99755.1-201ENST00000414048 380 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 CYCSP32-201ENST00000440548 321 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 PIGFP3-201ENST00000441918 722 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.58□□□□□ -1.84
PNKPQ96T60 KC877373.1-201ENST00000479066 408 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.58□□□□□ -1.84
PNKPQ96T60 MIR892C-201ENST00000516410 77 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.58□□□□□ -1.84
PNKPQ96T60 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.58□□□□□ -1.84
PNKPQ96T60 DNAJC8P1-201ENST00000554535 372 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.58□□□□□ -1.84
PNKPQ96T60 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.58□□□□□ -1.84
PNKPQ96T60 OR1M4P-201ENST00000589199 287 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 AC008737.2-201ENST00000599446 118 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 AC123912.5-201ENST00000605470 343 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 AC073476.4-201ENST00000628409 72 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PNKPQ96T60 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PNKPQ96T60 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PNKPQ96T60 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PNKPQ96T60 AL353746.1-201ENST00000566293 6881 ntBASIC3.58□□□□□ -1.84
PNKPQ96T60 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PNKPQ96T60 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PNKPQ96T60 SNORA38.1-201ENST00000364172 131 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 RNU6-639P-201ENST00000384074 107 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 RNU6-331P-201ENST00000384724 107 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 RPL21P3-201ENST00000395517 478 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 MIR1290-201ENST00000408735 78 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 AC113618.1-201ENST00000416747 285 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 AC005300.1-201ENST00000428401 373 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 AL645568.3-201ENST00000433683 316 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 AC009969.1-201ENST00000438726 172 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 MTND5P30-201ENST00000452896 1731 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 CECR9-201ENST00000453421 199 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 MTND4P1-201ENST00000457501 1466 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 SNORD5.1-201ENST00000458800 75 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 AC146507.2-201ENST00000460608 476 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.57□□□□□ -1.84
PNKPQ96T60 HMGB1P30-201ENST00000492455 606 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.57□□□□□ -1.84
PNKPQ96T60 PTP4A1P4-201ENST00000512479 322 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 RNU6-120P-201ENST00000516077 103 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 RN7SKP295-201ENST00000517264 153 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 RNU6-988P-201ENST00000519081 107 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.57□□□□□ -1.84
PNKPQ96T60 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.57□□□□□ -1.84
PNKPQ96T60 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.57□□□□□ -1.84
PNKPQ96T60 AC011494.1-201ENST00000596454 237 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.57□□□□□ -1.84
PNKPQ96T60 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.57□□□□□ -1.84
PNKPQ96T60 AC005183.1-201ENST00000603687 1979 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.57□□□□□ -1.84
PNKPQ96T60 RMST_4.1-201ENST00000616886 107 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 AC093831.2-201ENST00000624393 3427 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.57□□□□□ -1.84
PNKPQ96T60 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PNKPQ96T60 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.57□□□□□ -1.84
PNKPQ96T60 AL021368.2-201ENST00000606125 5352 ntBASIC3.57□□□□□ -1.84
PNKPQ96T60 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.57□□□□□ -1.84
PNKPQ96T60 AL133383.2-201ENST00000622958 2336 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PNKPQ96T60 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PNKPQ96T60 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PNKPQ96T60 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.56□□□□□ -1.84
PNKPQ96T60 Y_RNA.145-201ENST00000363527 102 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 Y_RNA.148-201ENST00000363557 117 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 RNU6-384P-201ENST00000364900 104 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 SNORD6-201ENST00000365444 73 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 MIR517A-201ENST00000385001 87 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 SNORA75.6-201ENST00000391318 127 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 AL445529.1-201ENST00000398713 389 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 RNU2-33P-201ENST00000410344 192 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 Z92545.1-201ENST00000411782 234 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PNKPQ96T60 AL592148.1-201ENST00000413568 445 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 MYL8P-204ENST00000431574 518 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 AL160004.2-201ENST00000432935 350 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.56□□□□□ -1.84
PNKPQ96T60 AC011005.2-201ENST00000487324 359 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms