Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.5□□□□□ -1.69
NFKB1P19838 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NFKB1P19838 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NFKB1P19838 RAD17P1-201ENST00000418130 2042 ntBASIC4.5□□□□□ -1.69
NFKB1P19838 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.5□□□□□ -1.69
NFKB1P19838 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
NFKB1P19838 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.49□□□□□ -1.69
NFKB1P19838 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.49□□□□□ -1.69
NFKB1P19838 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
NFKB1P19838 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
NFKB1P19838 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NFKB1P19838 SNORD32A-201ENST00000364805 84 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 Z98749.2-208ENST00000381646 500 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 SNORD116-18-201ENST00000383961 92 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 MTHFD2P2-201ENST00000407725 247 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 RNU6-1245P-201ENST00000411130 106 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.49□□□□□ -1.69
NFKB1P19838 SETP5-201ENST00000437270 562 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 Z82210.1-201ENST00000440037 231 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.49□□□□□ -1.69
NFKB1P19838 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.49□□□□□ -1.69
NFKB1P19838 AL451050.1-201ENST00000450126 415 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 RN7SL860P-201ENST00000473738 223 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.49□□□□□ -1.69
NFKB1P19838 RNU6-703P-201ENST00000516946 107 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 RPL23AP97-201ENST00000568955 471 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 AC053481.4-201ENST00000583164 216 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.49□□□□□ -1.69
NFKB1P19838 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.49□□□□□ -1.69
NFKB1P19838 AL138721.1-201ENST00000616756 179 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 AP005019.3-201ENST00000620418 560 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NFKB1P19838 SNORA43.4-201ENST00000629559 138 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NFKB1P19838 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.49□□□□□ -1.69
NFKB1P19838 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NFKB1P19838 AL356489.2-201ENST00000566968 3528 ntBASIC4.49□□□□□ -1.69
NFKB1P19838 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
NFKB1P19838 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NFKB1P19838 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NFKB1P19838 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
NFKB1P19838 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NFKB1P19838 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NFKB1P19838 OR56B2P-202ENST00000641377 2453 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
NFKB1P19838 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.48□□□□□ -1.69
NFKB1P19838 RNU6-942P-201ENST00000363002 107 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 Y_RNA.272-201ENST00000364696 102 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 RNU6-1130P-201ENST00000365434 107 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 RNU6-142P-201ENST00000384019 107 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 MIR518D-201ENST00000385014 87 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 HLFP1-201ENST00000402375 499 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 RNA5SP146-201ENST00000410743 123 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 TOMM22P1-201ENST00000418578 312 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 RPS12P23-201ENST00000419579 400 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 RPL23AP1-201ENST00000428990 471 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.48□□□□□ -1.69
NFKB1P19838 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.48□□□□□ -1.69
NFKB1P19838 snoU13.24-201ENST00000458998 104 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 AC093840.1-201ENST00000511599 336 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NFKB1P19838 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.48□□□□□ -1.69
NFKB1P19838 RNU6-313P-201ENST00000516317 112 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 RNU6-1183P-201ENST00000517054 60 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.48□□□□□ -1.69
NFKB1P19838 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.48□□□□□ -1.69
NFKB1P19838 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.48□□□□□ -1.69
NFKB1P19838 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.48□□□□□ -1.69
NFKB1P19838 MIR5692C2-201ENST00000577959 77 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 SNRPGP15-201ENST00000600149 222 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 AL356157.2-201ENST00000605122 111 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 AC005828.6-201ENST00000606610 232 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 MFSD8-216ENST00000641147 4009 ntBASIC4.48□□□□□ -1.69
NFKB1P19838 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NFKB1P19838 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NFKB1P19838 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NFKB1P19838 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.48□□□□□ -1.69
NFKB1P19838 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NFKB1P19838 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.48□□□□□ -1.69
NFKB1P19838 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.48□□□□□ -1.69
NFKB1P19838 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
NFKB1P19838 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NFKB1P19838 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NFKB1P19838 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
NFKB1P19838 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NFKB1P19838 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NFKB1P19838 AC118273.1-201ENST00000525324 3006 ntBASIC4.47□□□□□ -1.69
NFKB1P19838 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NFKB1P19838 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NFKB1P19838 Y_RNA.343-201ENST00000365354 112 ntBASIC4.47□□□□□ -1.69
NFKB1P19838 RNU6-213P-201ENST00000384051 104 ntBASIC4.47□□□□□ -1.69
NFKB1P19838 MIR129-1-201ENST00000384972 72 ntBASIC4.47□□□□□ -1.69
NFKB1P19838 RNA5SP332-201ENST00000391063 115 ntBASIC4.47□□□□□ -1.69
NFKB1P19838 AC009237.7-201ENST00000447357 229 ntBASIC4.47□□□□□ -1.69
NFKB1P19838 RNU6-58P-201ENST00000517143 103 ntBASIC4.47□□□□□ -1.69
NFKB1P19838 IGLV3-26-201ENST00000520756 302 ntBASIC4.47□□□□□ -1.69
NFKB1P19838 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.47□□□□□ -1.69
NFKB1P19838 AC005176.2-201ENST00000596933 147 ntBASIC4.47□□□□□ -1.69
NFKB1P19838 AL590392.1-201ENST00000604960 446 ntBASIC4.47□□□□□ -1.69
NFKB1P19838 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 236.5 ms