Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KRT40Q6A162 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KRT40Q6A162 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRT40Q6A162 OR4G2P-202ENST00000641004 1759 ntBASIC3.89□□□□□ -1.79
KRT40Q6A162 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRT40Q6A162 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.89□□□□□ -1.79
KRT40Q6A162 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KRT40Q6A162 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRT40Q6A162 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KRT40Q6A162 ZNF807-201ENST00000328088 1707 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KRT40Q6A162 UBE2L2-201ENST00000254302 429 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 Y_RNA.252-201ENST00000364556 101 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 RNY1P14-201ENST00000384426 108 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 MIR514A1-201ENST00000385133 98 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AL031121.1-201ENST00000406553 254 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 MIR548F4-201ENST00000408515 105 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AL513331.1-201ENST00000411908 397 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AC063979.1-201ENST00000415539 377 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AC243428.1-201ENST00000421099 264 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 HMGB1P27-201ENST00000431429 603 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT40Q6A162 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.88□□□□□ -1.79
KRT40Q6A162 RNU7-138P-201ENST00000459479 64 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 RPL37P6-201ENST00000460682 294 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT40Q6A162 AC096745.1-201ENST00000509945 370 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 FCF1P8-201ENST00000510322 597 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 RNU1-54P-201ENST00000517181 120 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT40Q6A162 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.88□□□□□ -1.79
KRT40Q6A162 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT40Q6A162 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.88□□□□□ -1.79
KRT40Q6A162 MIR4325-201ENST00000583049 90 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.88□□□□□ -1.79
KRT40Q6A162 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KRT40Q6A162 AC011890.2-201ENST00000613393 294 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AC083806.3-201ENST00000614016 455 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AC010205.1-201ENST00000616668 449 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AL031601.2-202ENST00000622650 282 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.88□□□□□ -1.79
KRT40Q6A162 Z99571.1-201ENST00000636677 394 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 AC017071.1-201ENST00000564407 2204 ntBASIC3.88□□□□□ -1.79
KRT40Q6A162 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRT40Q6A162 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT40Q6A162 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT40Q6A162 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT40Q6A162 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRT40Q6A162 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRT40Q6A162 Y_RNA.158-201ENST00000363651 101 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 RNU6-331P-201ENST00000384724 107 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 SNORD73A-201ENST00000386062 65 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 MRPL42P3-201ENST00000401492 326 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 RNU6-607P-201ENST00000411283 108 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT40Q6A162 COTL1P1-201ENST00000422309 375 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 HMGB1P9-201ENST00000429856 646 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT40Q6A162 SNORD108-201ENST00000459332 71 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 RPL9P32-201ENST00000464118 620 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.87□□□□□ -1.79
KRT40Q6A162 AC022493.1-201ENST00000492984 337 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 VN1R104P-201ENST00000505115 1009 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 NDUFB4P9-201ENST00000511646 388 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT40Q6A162 AL117187.1-201ENST00000555482 181 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.87□□□□□ -1.79
KRT40Q6A162 MIR548AC-201ENST00000585049 88 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 AC098826.3-201ENST00000603823 466 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.87□□□□□ -1.79
KRT40Q6A162 PISRT1.1-201ENST00000616930 107 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 7SK.10-201ENST00000621414 298 ntBASIC3.87□□□□□ -1.79
KRT40Q6A162 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
KRT40Q6A162 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRT40Q6A162 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.86□□□□□ -1.79
KRT40Q6A162 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.86□□□□□ -1.79
KRT40Q6A162 RNU5A-1-201ENST00000362698 116 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 RNU6-512P-201ENST00000364438 103 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 RNU6-335P-201ENST00000364563 113 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 RNU6-842P-201ENST00000384269 107 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 Y_RNA.480-201ENST00000384364 102 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 RNU6-1106P-201ENST00000390845 107 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 RNU6-985P-201ENST00000410182 104 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 RNA5SP31-201ENST00000411144 127 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.86□□□□□ -1.79
KRT40Q6A162 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.86□□□□□ -1.79
KRT40Q6A162 AL159169.1-201ENST00000421119 127 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.86□□□□□ -1.79
KRT40Q6A162 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.86□□□□□ -1.79
KRT40Q6A162 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.86□□□□□ -1.79
KRT40Q6A162 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.86□□□□□ -1.79
KRT40Q6A162 AC087588.1-201ENST00000462203 316 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 AC010285.1-201ENST00000470580 392 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 AC093663.1-201ENST00000497190 394 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.86□□□□□ -1.79
KRT40Q6A162 RNU1-86P-201ENST00000516108 154 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 Vault.1-201ENST00000516474 102 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 SCARNA16.2-201ENST00000516520 172 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 RNU1-107P-201ENST00000516617 154 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms