Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 PIGPP2-201ENST00000411569 458 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC027644.1-201ENST00000419595 298 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC139712.2-201ENST00000424302 339 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 CR848007.2-201ENST00000424918 787 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 USP9YP18-201ENST00000425912 695 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 TOMM20P4-201ENST00000427861 435 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 USP9YP17-201ENST00000444617 696 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AL035666.1-201ENST00000446195 348 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC009474.2-201ENST00000451383 136 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 RPS29P29-201ENST00000456396 171 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC087477.1-201ENST00000465747 340 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 RPL36AP21-201ENST00000490372 323 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU7-40P-201ENST00000516397 64 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC006518.2-201ENST00000542513 940 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 MIR3660-201ENST00000584845 100 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC073410.2-201ENST00000603240 332 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 DPPA3P3-201ENST00000603842 430 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC123912.5-201ENST00000605470 343 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AL583856.2-201ENST00000606298 543 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 Z82243.1-201ENST00000609432 473 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AL445264.1-201ENST00000621719 171 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 AC120349.2-201ENST00000625002 298 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 HAUS6P2-201ENST00000433254 2404 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.78□□□□□ -2.28
TRAV13-1A0A0B4J241 RNU6-414P-201ENST00000363705 104 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 RNU4-51P-201ENST00000364206 140 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 RNU6-188P-201ENST00000364207 107 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 RNU6-1207P-201ENST00000384343 107 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AC027119.1-201ENST00000440877 241 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 BRK1P2-201ENST00000442875 223 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 MRPL42P4-201ENST00000453267 443 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AP001025.1-201ENST00000486139 332 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AC093852.1-201ENST00000503587 266 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 RNU2-53P-201ENST00000516257 147 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 SNORA76.2-201ENST00000517095 137 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AC044913.1-201ENST00000557200 430 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 SUB1P4-201ENST00000566062 339 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AC023043.2-201ENST00000589678 1026 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AL133445.2-201ENST00000611191 527 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AC243773.3-201ENST00000613270 256 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 MIR8063-201ENST00000621930 81 ntBASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV13-1A0A0B4J241 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 RNU1-17P-201ENST00000363022 152 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 Y_RNA.99-201ENST00000363138 105 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 RNU6-457P-201ENST00000363999 107 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 RNU6-1187P-201ENST00000364771 110 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 CST2P1-201ENST00000425770 87 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 MTCO3P5-201ENST00000433620 714 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AC104058.1-201ENST00000448028 297 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 RPL7P55-201ENST00000450522 746 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 RPL39P28-201ENST00000465655 155 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AC093809.1-201ENST00000509155 340 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 RNA5SP404-201ENST00000517118 132 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 RN7SKP258-201ENST00000517151 304 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 MIR4789-201ENST00000577469 82 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 MIR4782-201ENST00000577987 79 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 KATNBL1P5-201ENST00000605015 517 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AL157834.3-201ENST00000615543 103 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 AC099063.3-201ENST00000642066 185 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 ICE2P2-201ENST00000483823 2787 ntBASIC0.76□□□□□ -2.29
TRAV13-1A0A0B4J241 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV13-1A0A0B4J241 SNORA7.1-201ENST00000363750 139 ntBASIC0.75□□□□□ -2.29
TRAV13-1A0A0B4J241 RNU6-898P-201ENST00000365627 104 ntBASIC0.75□□□□□ -2.29
TRAV13-1A0A0B4J241 AC083799.1-201ENST00000366451 910 ntBASIC0.75□□□□□ -2.29
TRAV13-1A0A0B4J241 MIR186-201ENST00000384988 86 ntBASIC0.75□□□□□ -2.29
TRAV13-1A0A0B4J241 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 297.7 ms