Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 PMCHL2-203ENST00000457791 237 ntBASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 RNA5SP290-201ENST00000517133 127 ntBASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 RN7SKP258-201ENST00000517151 304 ntBASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 CENPUP1-201ENST00000526649 1202 ntBASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 MIR4293-201ENST00000584305 78 ntBASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 AC005261.5-201ENST00000596280 355 ntBASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 AC063943.3-201ENST00000615562 356 ntBASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 AC010338.1-201ENST00000621823 717 ntBASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 AC024940.5-201ENST00000622889 474 ntBASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 AL136313.1-201ENST00000624804 202 ntBASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
DDX43Q9NXZ2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 SNORD56.2-201ENST00000363242 71 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 RNU6-511P-201ENST00000363496 107 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 RNU6-1284P-201ENST00000363701 100 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 RNY3P13-201ENST00000365542 102 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 SNORD21-201ENST00000383953 95 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 Y_RNA.510-201ENST00000384511 114 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 SNORD88.1-201ENST00000408684 91 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 RNU2-9P-201ENST00000410194 145 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 RNU6-1068P-201ENST00000410958 103 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 BTF3L4P3-201ENST00000418879 476 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC087499.2-201ENST00000432861 149 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC105272.1-201ENST00000438604 198 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 RPL12P25-201ENST00000455592 494 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 RNU6-261P-201ENST00000459506 102 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 RPL21P41-201ENST00000459863 264 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC114786.4-201ENST00000508771 728 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC114797.1-201ENST00000514003 728 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 SNORD27.1-201ENST00000516319 72 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 GTF3AP2-201ENST00000557014 266 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC010653.1-201ENST00000571108 881 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AL353621.2-201ENST00000605340 133 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC107871.2-201ENST00000612894 502 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AC090617.7-201ENST00000623952 126 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 AL359697.1-201ENST00000624879 587 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 ZNF519P1-201ENST00000449011 1626 ntBASIC3.03□□□□□ -1.92
DDX43Q9NXZ2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 RNU1-35P-201ENST00000362782 153 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 SNORA5B-201ENST00000363786 132 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 Y_RNA.245-201ENST00000364493 95 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 Y_RNA.367-201ENST00000365544 101 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 Y_RNA.509-201ENST00000384506 99 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 MIR888-201ENST00000401186 77 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 RNA5SP118-201ENST00000410385 109 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AC009414.1-201ENST00000427200 443 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 RPL36AP53-201ENST00000432891 316 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 SEPT14P3-201ENST00000439401 183 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AL732372.2-207ENST00000445840 183 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 SEPT14P2-201ENST00000453405 183 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AL356010.1-201ENST00000456364 102 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 SEPT14P4-201ENST00000513445 186 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 SNORA31.26-201ENST00000517250 137 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 FO082796.1-201ENST00000523795 183 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AC098848.2-201ENST00000588023 330 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 ELOCP29-201ENST00000588193 334 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AC023043.3-201ENST00000593113 385 ntBASIC3.02□□□□□ -1.93
DDX43Q9NXZ2 AC010620.2-201ENST00000600135 313 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms