Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RNF216Q9NWF9 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF216Q9NWF9 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF216Q9NWF9 AL731532.1-201ENST00000623972 4236 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF216Q9NWF9 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF216Q9NWF9 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF216Q9NWF9 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF216Q9NWF9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF216Q9NWF9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF216Q9NWF9 Y_RNA.95-201ENST00000363079 95 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 LCN1P2-201ENST00000372030 223 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 EIF4A1P3-201ENST00000411521 244 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 AC090602.1-201ENST00000469695 252 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 RPS29P21-201ENST00000496272 170 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 RNU7-172P-201ENST00000517125 64 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 MIR3618-201ENST00000580330 88 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 MIR3117-201ENST00000584034 78 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF216Q9NWF9 AC024220.1-201ENST00000603675 484 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 AC124916.2-201ENST00000604416 224 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 RNA5SP108-201ENST00000605921 117 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 AL672167.1-204ENST00000641875 3017 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF216Q9NWF9 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF216Q9NWF9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
RNF216Q9NWF9 DOCK11P1-201ENST00000553480 5932 ntBASIC7.06□□□□□ -1.28
RNF216Q9NWF9 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 PARP4P2-201ENST00000446672 3326 ntBASIC7.05□□□□□ -1.28
RNF216Q9NWF9 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 snoU2_19.1-201ENST00000362361 80 ntBASIC7.05□□□□□ -1.28
RNF216Q9NWF9 SDHCP2-201ENST00000398565 501 ntBASIC7.05□□□□□ -1.28
RNF216Q9NWF9 PPBPP1-201ENST00000510807 373 ntBASIC7.05□□□□□ -1.28
RNF216Q9NWF9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 AL138895.2-201ENST00000603019 178 ntBASIC7.05□□□□□ -1.28
RNF216Q9NWF9 AC073413.2-201ENST00000604332 360 ntBASIC7.05□□□□□ -1.28
RNF216Q9NWF9 AC097467.4-201ENST00000605504 141 ntBASIC7.05□□□□□ -1.28
RNF216Q9NWF9 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 MIR203B-201ENST00000636080 86 ntBASIC7.05□□□□□ -1.28
RNF216Q9NWF9 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF216Q9NWF9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 SNORD16-201ENST00000362803 99 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 RNA5SP350-201ENST00000363298 111 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 RNU6-1210P-201ENST00000363775 107 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 MIR518F-201ENST00000384973 87 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 RNU2-49P-201ENST00000410666 184 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 Y_RNA.621-201ENST00000411065 96 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 RN7SL738P-201ENST00000470264 297 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 RN7SL214P-201ENST00000487317 265 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 LSM3P4-201ENST00000502948 309 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 ZNF519P4-201ENST00000514008 125 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 AC136777.2-201ENST00000522979 358 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 RNU6-91P-201ENST00000607774 107 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 AC024884.1-201ENST00000620583 399 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 MIR1255B1-201ENST00000636325 63 ntBASIC7.04□□□□□ -1.28
RNF216Q9NWF9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF216Q9NWF9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF216Q9NWF9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF216Q9NWF9 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF216Q9NWF9 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF216Q9NWF9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF216Q9NWF9 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF216Q9NWF9 RNU6-655P-201ENST00000362858 107 ntBASIC7.03□□□□□ -1.28
RNF216Q9NWF9 SNORD116-10-201ENST00000363791 102 ntBASIC7.03□□□□□ -1.28
RNF216Q9NWF9 RNU4-67P-201ENST00000364569 141 ntBASIC7.03□□□□□ -1.28
RNF216Q9NWF9 SNORA70H-201ENST00000383910 135 ntBASIC7.03□□□□□ -1.28
RNF216Q9NWF9 Y_RNA.410-201ENST00000383992 113 ntBASIC7.03□□□□□ -1.28
RNF216Q9NWF9 SNORA70J-201ENST00000384182 135 ntBASIC7.03□□□□□ -1.28
RNF216Q9NWF9 MIR605-201ENST00000385078 83 ntBASIC7.03□□□□□ -1.28
RNF216Q9NWF9 RN7SKP229-201ENST00000410465 302 ntBASIC7.03□□□□□ -1.28
RNF216Q9NWF9 AC068228.1-201ENST00000461723 211 ntBASIC7.03□□□□□ -1.28
RNF216Q9NWF9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF216Q9NWF9 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.03□□□□□ -1.28
RNF216Q9NWF9 AC096577.2-201ENST00000611455 153 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 269.4 ms