Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RPS24P13-201ENST00000442520 397 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 GPM6BP1-201ENST00000446387 144 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 ELOCP24-201ENST00000456370 334 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 snoU13.4-201ENST00000458916 104 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 CENPBD1P1-201ENST00000464061 469 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 RN7SL601P-201ENST00000471221 293 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 S100A11P1-201ENST00000477525 312 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.67□□□□□ -1.82
PNKPQ96T60 RNU6-1045P-201ENST00000516321 107 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 Vault.1-201ENST00000516474 102 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 RNU6-1256P-201ENST00000516539 103 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 AC087854.1-201ENST00000519706 414 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.67□□□□□ -1.82
PNKPQ96T60 AC026371.1-201ENST00000551867 419 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.67□□□□□ -1.82
PNKPQ96T60 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.67□□□□□ -1.82
PNKPQ96T60 MIR548AC-201ENST00000585049 88 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.67□□□□□ -1.82
PNKPQ96T60 AL162730.1-201ENST00000605734 292 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 AC116312.1-201ENST00000606841 314 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PNKPQ96T60 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
PNKPQ96T60 AC066616.2-201ENST00000559334 1481 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PNKPQ96T60 SNORA63C-201ENST00000364578 129 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 RNU6-738P-201ENST00000384531 106 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 RNU6-95P-201ENST00000384697 107 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
PNKPQ96T60 Y_RNA.646-201ENST00000410980 101 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.66□□□□□ -1.82
PNKPQ96T60 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.66□□□□□ -1.82
PNKPQ96T60 AL645939.1-201ENST00000453429 797 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 RN7SL594P-201ENST00000470590 287 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 AL049830.2-201ENST00000480072 201 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.66□□□□□ -1.82
PNKPQ96T60 SCARNA15.2-201ENST00000516409 127 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 SNORA70.19-201ENST00000516717 90 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 SCARNA20.6-201ENST00000517251 106 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.66□□□□□ -1.82
PNKPQ96T60 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.66□□□□□ -1.82
PNKPQ96T60 AL161798.1-201ENST00000604630 131 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.66□□□□□ -1.82
PNKPQ96T60 AL157817.1-201ENST00000614264 790 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.66□□□□□ -1.82
PNKPQ96T60 AC098657.3-201ENST00000620434 263 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 AL031601.2-202ENST00000622650 282 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 uc_338.22-201ENST00000622722 187 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.66□□□□□ -1.82
PNKPQ96T60 AL669831.3-213ENST00000636676 183 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.66□□□□□ -1.82
PNKPQ96T60 KPNA2P1-201ENST00000458289 1591 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PNKPQ96T60 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.66□□□□□ -1.82
PNKPQ96T60 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.66□□□□□ -1.82
PNKPQ96T60 MTND5P19-201ENST00000424872 1794 ntBASIC3.66□□□□□ -1.82
PNKPQ96T60 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PNKPQ96T60 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PNKPQ96T60 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.65□□□□□ -1.82
PNKPQ96T60 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.82
PNKPQ96T60 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PNKPQ96T60 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
PNKPQ96T60 Y_RNA.202-201ENST00000364083 110 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 RNU1-33P-201ENST00000364249 162 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 Y_RNA.480-201ENST00000384364 102 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 RN7SKP53-201ENST00000411337 315 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.65□□□□□ -1.83
PNKPQ96T60 EI24P1-201ENST00000416584 867 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.65□□□□□ -1.83
PNKPQ96T60 HIGD1AP11-201ENST00000438361 280 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 AL359672.1-201ENST00000442302 409 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.65□□□□□ -1.83
PNKPQ96T60 MIR2053-201ENST00000459295 91 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 AC025518.1-201ENST00000479856 347 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 AC022493.1-201ENST00000492984 337 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PNKPQ96T60 AC116337.1-201ENST00000509680 687 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 AL359273.1-201ENST00000510918 627 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 AC092436.3-201ENST00000511788 257 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 RNU1-143P-201ENST00000516296 146 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 RNU6-1016P-201ENST00000516689 94 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 RNU6-143P-201ENST00000516942 93 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 RNU6-1073P-201ENST00000517182 106 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.65□□□□□ -1.83
PNKPQ96T60 AC006504.6-201ENST00000590142 199 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 NUTF2P8-201ENST00000604593 363 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.65□□□□□ -1.83
PNKPQ96T60 AC019193.3-201ENST00000609144 554 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 U1.23-201ENST00000610293 146 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 RNU1-68P-201ENST00000615382 146 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 SNORD39.4-201ENST00000620099 78 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 U1.39-201ENST00000621562 146 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 AP003355.3-201ENST00000623465 114 ntBASIC3.65□□□□□ -1.83
PNKPQ96T60 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.65□□□□□ -1.83
PNKPQ96T60 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.65□□□□□ -1.83
PNKPQ96T60 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.65□□□□□ -1.83
PNKPQ96T60 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PNKPQ96T60 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PNKPQ96T60 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PNKPQ96T60 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms