Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 MRPL42P6-201ENST00000486397 371 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXD4Q12950 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.17□□□□□ -1.9
FOXD4Q12950 AC109927.2-201ENST00000506416 303 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 RN7SKP219-201ENST00000516825 296 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 RN7SKP272-201ENST00000516988 232 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 AC011611.1-201ENST00000552179 197 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.17□□□□□ -1.9
FOXD4Q12950 MIR4703-201ENST00000577728 79 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 AC008121.1-201ENST00000603244 268 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 HMGB1P24-202ENST00000615653 685 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 AC024940.5-201ENST00000622889 474 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
FOXD4Q12950 AC006020.1-201ENST00000420179 1854 ntBASIC3.17□□□□□ -1.9
FOXD4Q12950 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
FOXD4Q12950 MTND5P17-201ENST00000418405 1603 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 RNU6-552P-201ENST00000362869 119 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 RNU1-33P-201ENST00000364249 162 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 MIR578-201ENST00000384828 96 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 MIR524-201ENST00000385242 87 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
FOXD4Q12950 EEF1A1P40-201ENST00000412883 573 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 OR6C66P-201ENST00000414917 930 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXD4Q12950 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXD4Q12950 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXD4Q12950 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXD4Q12950 MTND1P18-201ENST00000448191 573 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXD4Q12950 HMGN1P18-201ENST00000457642 277 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 RPS4XP2-201ENST00000458402 793 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC010401.1-201ENST00000463867 348 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC117503.1-201ENST00000472241 394 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC090096.1-201ENST00000489168 390 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC018437.1-201ENST00000492214 406 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXD4Q12950 AC011352.1-201ENST00000512300 793 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 MIR892C-201ENST00000516410 77 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 Y_RNA.693-201ENST00000516641 110 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC068657.1-201ENST00000520807 306 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC025755.1-201ENST00000521306 278 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXD4Q12950 AP002404.1-201ENST00000532005 451 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.16□□□□□ -1.9
FOXD4Q12950 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXD4Q12950 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXD4Q12950 HMGB1P33-201ENST00000563485 527 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXD4Q12950 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.16□□□□□ -1.9
FOXD4Q12950 AC105245.1-201ENST00000581934 244 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXD4Q12950 AC007621.1-201ENST00000604544 437 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AC008945.2-201ENST00000606056 604 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AL359547.2-201ENST00000615810 418 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 AP003400.5-201ENST00000624827 617 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.16□□□□□ -1.9
FOXD4Q12950 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.16□□□□□ -1.9
FOXD4Q12950 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
FOXD4Q12950 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.15□□□□□ -1.9
FOXD4Q12950 RNU6-903P-201ENST00000391270 109 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
FOXD4Q12950 RNU6-1068P-201ENST00000410958 103 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.15□□□□□ -1.91
FOXD4Q12950 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXD4Q12950 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.15□□□□□ -1.91
FOXD4Q12950 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXD4Q12950 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.15□□□□□ -1.91
FOXD4Q12950 AC073415.1-201ENST00000449240 153 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXD4Q12950 AC022364.2-201ENST00000457963 554 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 RN7SL594P-201ENST00000470590 287 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 RN7SL429P-201ENST00000479090 223 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 RN7SL489P-201ENST00000486185 223 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 RN7SL327P-201ENST00000488659 223 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 RNU6-579P-201ENST00000516879 102 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 RNU6-1315P-201ENST00000517187 99 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 AC009902.1-201ENST00000519351 183 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXD4Q12950 RANP3-201ENST00000530970 276 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 AC025678.1-201ENST00000567861 338 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 MIR1273C-201ENST00000578669 77 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.15□□□□□ -1.91
FOXD4Q12950 BNIP3P30-201ENST00000601184 574 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 AP001330.5-201ENST00000607176 411 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 RN7SL853P-201ENST00000617250 223 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.15□□□□□ -1.91
FOXD4Q12950 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.15□□□□□ -1.91
FOXD4Q12950 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
FOXD4Q12950 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
FOXD4Q12950 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
FOXD4Q12950 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.14□□□□□ -1.91
FOXD4Q12950 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
FOXD4Q12950 Y_RNA.6-201ENST00000362350 114 ntBASIC3.14□□□□□ -1.91
FOXD4Q12950 SNORA67.1-201ENST00000364749 141 ntBASIC3.14□□□□□ -1.91
FOXD4Q12950 RNU6-1303P-201ENST00000364841 107 ntBASIC3.14□□□□□ -1.91
FOXD4Q12950 RNU6-1280P-201ENST00000365211 107 ntBASIC3.14□□□□□ -1.91
FOXD4Q12950 RPL21P3-201ENST00000395517 478 ntBASIC3.14□□□□□ -1.91
FOXD4Q12950 RNU6-1025P-201ENST00000410629 104 ntBASIC3.14□□□□□ -1.91
FOXD4Q12950 FCF1P9-201ENST00000412546 282 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms