Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC010378.1-201ENST00000619270 362 ntBASIC1.84□□□□□ -2.11
CCNB1IP1Q9NPC3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.84□□□□□ -2.11
CCNB1IP1Q9NPC3 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.84□□□□□ -2.11
CCNB1IP1Q9NPC3 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.84□□□□□ -2.11
CCNB1IP1Q9NPC3 AC103710.2-202ENST00000641454 2853 ntBASIC1.84□□□□□ -2.12
CCNB1IP1Q9NPC3 ZNF702P-202ENST00000434269 1966 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 Y_RNA.46-201ENST00000362695 102 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-931P-201ENST00000363850 107 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 RNY3P13-201ENST00000365542 102 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 SNORA4.3-201ENST00000365564 137 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AL591034.2-201ENST00000402839 359 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 FTH1P15-201ENST00000406984 280 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 RN7SKP32-201ENST00000410167 303 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU2-36P-201ENST00000410361 191 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 RNA5SP450-201ENST00000411206 102 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 USP9YP24-201ENST00000434374 697 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 USP9YP17-201ENST00000444617 696 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC096638.1-201ENST00000444678 216 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC003071.1-201ENST00000451219 789 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 USP9YP25-201ENST00000457708 443 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 ANXA2P1-201ENST00000505539 926 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC109927.2-201ENST00000506416 303 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-914P-201ENST00000516749 109 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 OR5B19P-201ENST00000531766 928 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC023050.2-201ENST00000544968 387 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 MIR4509-3-201ENST00000578671 94 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 MIR4307-201ENST00000582802 84 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 MIR4509-2-201ENST00000583920 94 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC087045.1-201ENST00000605856 382 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC022893.3-201ENST00000607665 437 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC108747.1-201ENST00000609508 535 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 MIR4509-1-201ENST00000618224 94 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC008121.3-201ENST00000618726 433 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AL589994.2-201ENST00000621124 579 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC017037.3-201ENST00000625016 472 ntBASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCNB1IP1Q9NPC3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU1-23P-201ENST00000363361 144 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 U3.13-201ENST00000364804 214 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-1176P-201ENST00000390955 107 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU2-62P-201ENST00000410868 191 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AL139415.2-201ENST00000431968 163 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AL591212.2-201ENST00000433923 257 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AC084290.1-201ENST00000434995 374 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 DNAJC19P4-201ENST00000440115 345 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 HMGB1P35-201ENST00000503360 598 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AL157871.3-201ENST00000557231 293 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 MIR4513-201ENST00000581077 86 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AC112187.2-201ENST00000604345 283 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AC091953.2-201ENST00000623979 160 ntBASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.82□□□□□ -2.12
CCNB1IP1Q9NPC3 AP006437.1-201ENST00000641440 3685 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU5E-6P-201ENST00000365574 115 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-157P-201ENST00000383957 107 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 SNORA3.2-201ENST00000408221 125 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 RN7SKP223-201ENST00000410582 62 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-1025P-201ENST00000410629 104 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 RN7SKP192-201ENST00000411291 327 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AL030996.1-201ENST00000411430 235 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 RPL9P6-201ENST00000492764 598 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AC008549.1-201ENST00000512900 643 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-677P-201ENST00000516914 101 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-1092P-201ENST00000516955 87 ntBASIC1.81□□□□□ -2.12
CCNB1IP1Q9NPC3 RNU6-1003P-201ENST00000517099 105 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms