Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AP000949.1-201ENST00000438328 629 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AC002381.1-201ENST00000447049 280 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 PAXBP1P1-201ENST00000449315 447 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AP1S2P1-201ENST00000457344 379 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 RNU7-59P-201ENST00000459101 61 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AC104982.1-201ENST00000478775 574 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 SNORA31.18-201ENST00000517043 134 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 RNU6-88P-201ENST00000606801 100 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AC010133.1-201ENST00000615809 842 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AP002371.2-201ENST00000624450 503 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 RNU6-97P-201ENST00000363387 104 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 RNU6-114P-201ENST00000384704 105 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 SNORA40.2-201ENST00000390847 128 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 HMGN1P14-201ENST00000412459 517 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 USP9YP26-201ENST00000421008 661 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AC007560.1-201ENST00000426912 237 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 USP12PX-201ENST00000432383 1057 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 ZNF886P-201ENST00000450781 723 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 TRGVB-201ENST00000453257 471 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 MTND1P16-201ENST00000465177 898 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AC104685.1-201ENST00000502445 371 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AC109445.1-201ENST00000512356 383 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 RNU6-276P-201ENST00000516114 96 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 NRON-201ENST00000517270 370 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AL391261.3-201ENST00000557194 520 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AL137003.2-201ENST00000606924 2538 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 Y_RNA.258-201ENST00000364613 105 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 RNU6-140P-201ENST00000384566 108 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 MTCYBP38-201ENST00000417160 1123 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 AIMP1P2-201ENST00000425294 312 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 ZNF863P-201ENST00000426746 417 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 RNA5SP121-201ENST00000516537 101 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 SNORA31.23-201ENST00000517219 133 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 AC007151.1-201ENST00000572774 483 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 AL020996.3-201ENST00000606617 222 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 AC239868.4-201ENST00000608318 671 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 AC090970.3-201ENST00000612566 866 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 MTND5P10-201ENST00000603719 1809 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 AC009902.3-201ENST00000606235 2172 ntBASIC1.62□□□□□ -2.15
SHANK3Q9BYB0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 RNU6-270P-201ENST00000364131 105 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 Y_RNA.548-201ENST00000384656 105 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 MTCYBP3-201ENST00000445588 1137 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AC110760.3-202ENST00000515177 371 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 SNORD19.2-201ENST00000516978 73 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AC021451.1-201ENST00000523498 1129 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AC087465.1-201ENST00000560574 245 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AL590095.2-201ENST00000604136 117 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AC112191.3-201ENST00000604371 277 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AF129408.1-201ENST00000608767 431 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AC103710.4-201ENST00000609301 899 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AC073308.1-201ENST00000623696 305 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 AL138960.2-201ENST00000625145 535 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 PCMTD1P7-201ENST00000634506 357 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 CCT4P2-201ENST00000233836 1548 ntBASIC1.61□□□□□ -2.15
SHANK3Q9BYB0 RNU6-203P-201ENST00000384038 104 ntBASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 RNU1-52P-201ENST00000384190 164 ntBASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 CYCSP48-201ENST00000417124 323 ntBASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 AL451054.2-201ENST00000420896 202 ntBASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 RPL31P63-201ENST00000422565 375 ntBASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 AL358794.1-201ENST00000445689 381 ntBASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 AC108059.3-201ENST00000456388 214 ntBASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 MEMO1P3-201ENST00000459811 302 ntBASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 MRPS17P3-201ENST00000465453 385 ntBASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 LARP1BP2-201ENST00000486594 519 ntBASIC1.6□□□□□ -2.15
SHANK3Q9BYB0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 259.2 ms