Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 MTCO2P19-201ENST00000427513 598 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.36□□□□□ -2.03
HDAC3O15379 UBE2V1P8-201ENST00000437166 265 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 MTATP6P13-201ENST00000438531 667 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 AC132479.1-201ENST00000449160 144 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 AC003071.1-201ENST00000451219 789 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 AC013267.1-201ENST00000458227 267 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 HSPE1P6-201ENST00000479457 291 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HDAC3O15379 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.36□□□□□ -2.03
HDAC3O15379 SNORA70.16-201ENST00000516390 95 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
HDAC3O15379 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.36□□□□□ -2.03
HDAC3O15379 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.36□□□□□ -2.03
HDAC3O15379 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.36□□□□□ -2.03
HDAC3O15379 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.36□□□□□ -2.03
HDAC3O15379 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.36□□□□□ -2.03
HDAC3O15379 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.36□□□□□ -2.03
HDAC3O15379 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.36□□□□□ -2.03
HDAC3O15379 AL121992.2-201ENST00000606262 256 ntBASIC2.36□□□□□ -2.03
HDAC3O15379 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.36□□□□□ -2.03
HDAC3O15379 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
HDAC3O15379 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.36□□□□□ -2.03
HDAC3O15379 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HDAC3O15379 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HDAC3O15379 SNORD56.2-201ENST00000363242 71 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 RNU6-1090P-201ENST00000364065 94 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 RNU6-1283P-201ENST00000365314 105 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 MIR514A1-201ENST00000385133 98 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 SNORD115-47-201ENST00000391226 86 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AL122016.1-201ENST00000403365 367 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 EIF1P1-201ENST00000421436 341 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.35□□□□□ -2.03
HDAC3O15379 AC098614.2-201ENST00000426040 255 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.35□□□□□ -2.03
HDAC3O15379 AC073464.1-201ENST00000429823 534 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 FCF1P1-201ENST00000432690 571 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AC107083.1-201ENST00000439643 279 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 RPS15AP27-201ENST00000449183 343 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.35□□□□□ -2.03
HDAC3O15379 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.35□□□□□ -2.03
HDAC3O15379 AL049714.1-201ENST00000466686 347 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AC128713.1-201ENST00000471495 306 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 RPL23AP45-201ENST00000476406 468 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AC096576.1-201ENST00000489014 359 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AC019235.1-201ENST00000503847 207 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AC097462.2-201ENST00000504623 481 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 HMGB1P29-201ENST00000505659 499 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.35□□□□□ -2.03
HDAC3O15379 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.35□□□□□ -2.03
HDAC3O15379 AC107222.1-201ENST00000510899 637 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.35□□□□□ -2.03
HDAC3O15379 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.35□□□□□ -2.03
HDAC3O15379 GLYCAM1-201ENST00000546596 285 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AC078814.3-201ENST00000553036 491 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 RPL23AP84-201ENST00000571193 464 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.35□□□□□ -2.03
HDAC3O15379 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.35□□□□□ -2.03
HDAC3O15379 AC007619.2-201ENST00000605743 379 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AC090132.2-201ENST00000615881 347 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HDAC3O15379 AL359880.1-201ENST00000621879 266 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.35□□□□□ -2.03
HDAC3O15379 AC008568.2-201ENST00000623862 2313 ntBASIC2.35□□□□□ -2.03
HDAC3O15379 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
HDAC3O15379 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HDAC3O15379 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
HDAC3O15379 RNU5A-1-201ENST00000362698 116 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 SNORA80A-201ENST00000363922 136 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 Y_RNA.367-201ENST00000365544 101 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 RNU5E-6P-201ENST00000365574 115 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 SMIM11P1-201ENST00000369586 178 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
HDAC3O15379 RNU6-1103P-201ENST00000384150 107 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 MIR1-2-201ENST00000384961 85 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 AL139039.1-201ENST00000401900 692 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 AL139397.2-201ENST00000404529 772 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 RNU2-8P-201ENST00000410727 190 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.34□□□□□ -2.03
HDAC3O15379 AC018630.2-202ENST00000422992 927 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 AC008850.1-201ENST00000427546 362 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.34□□□□□ -2.03
HDAC3O15379 AL139415.2-201ENST00000431968 163 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 AL136380.1-201ENST00000447970 162 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 AP001486.1-201ENST00000463339 476 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
HDAC3O15379 AC109927.2-201ENST00000506416 303 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 AC009646.1-201ENST00000510455 318 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 RN7SKP24-201ENST00000515888 284 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 RNU6-390P-201ENST00000516259 103 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 Y_RNA.704-201ENST00000516851 102 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 NRON-201ENST00000517270 370 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 RNU6-840P-201ENST00000517275 65 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms