Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-766P-201ENST00000362478 107 ntBASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 RNA5SP447-201ENST00000363749 119 ntBASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 ELOCP21-201ENST00000412558 336 ntBASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 RPL26P27-201ENST00000414397 437 ntBASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 AC243964.1-201ENST00000441814 261 ntBASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 ANP32BP2-201ENST00000454525 545 ntBASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 AC040958.1-201ENST00000561102 201 ntBASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 FAM91A3P-201ENST00000456826 2544 ntBASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC61Q9Y6R9 AC020633.1-201ENST00000468439 2247 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 AC007159.1-201ENST00000566529 4706 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 OR56B2P-202ENST00000641377 2453 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 RNU6-1048P-201ENST00000364054 107 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 Y_RNA.229-201ENST00000364347 113 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 SNORA20B-201ENST00000384220 132 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 RN7SKP16-201ENST00000410180 299 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 COX5BP7-201ENST00000414780 274 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 CYCSP49-201ENST00000420810 319 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 AC245047.4-201ENST00000433189 144 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 FTLP19-201ENST00000433300 394 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 SNORA43.4-201ENST00000629559 138 ntBASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC61Q9Y6R9 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 Y_RNA.120-201ENST00000363304 110 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 RNU6-1205P-201ENST00000363625 106 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 AL512604.1-201ENST00000404812 257 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 RNU4-43P-201ENST00000410628 137 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 AC096649.2-201ENST00000416186 393 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 AC008065.1-201ENST00000428525 348 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 FTH1P6-201ENST00000430768 320 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 AL162591.2-201ENST00000449634 317 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 NIP7P2-201ENST00000485801 544 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 AL049874.1-201ENST00000489560 388 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 TOMM20P2-201ENST00000540082 421 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 MIR5571-201ENST00000577998 113 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 MIR6830-201ENST00000636015 70 ntBASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC61Q9Y6R9 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 AP005432.1-201ENST00000580891 3485 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 U8.1-201ENST00000362843 134 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 RNU6-647P-201ENST00000364243 107 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 RNU6-793P-201ENST00000384233 104 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 RPL21P17-201ENST00000397467 475 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 RNU6-710P-201ENST00000410424 105 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 RPL17P36-201ENST00000420302 549 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 RPL23AP95-201ENST00000426806 265 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 AL135790.2-201ENST00000437701 267 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 GPM6BP3-201ENST00000442797 145 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 AC146507.2-201ENST00000460608 476 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 SNORA43.2-201ENST00000516652 128 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 RNU6-709P-201ENST00000517257 104 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 AC093249.4-201ENST00000564755 259 ntBASIC6.56□□□□□ -1.36
CCDC61Q9Y6R9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms