Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 Y_RNA.48-201ENST00000362710 103 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 Y_RNA.105-201ENST00000363182 111 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 Y_RNA.183-201ENST00000363882 113 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 SNORD27-201ENST00000363981 72 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 RNU6-280P-201ENST00000364145 104 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 RNU6-886P-201ENST00000384319 105 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 RNU6-821P-201ENST00000390995 107 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 HDGFP1-201ENST00000405943 252 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 MIR548I2-201ENST00000408348 149 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 AL160275.2-201ENST00000412010 394 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 AL445584.1-201ENST00000431451 330 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.19□□□□□ -1.74
EPHB3P54753 OR2AQ1P-201ENST00000451972 200 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.19□□□□□ -1.74
EPHB3P54753 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.19□□□□□ -1.74
EPHB3P54753 PPIAP15-201ENST00000479662 484 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 RN7SL323P-201ENST00000494712 295 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 AC005798.1-201ENST00000513715 387 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 SNORA31.3-201ENST00000516029 96 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.19□□□□□ -1.74
EPHB3P54753 IGKV2D-36-201ENST00000518643 226 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.19□□□□□ -1.74
EPHB3P54753 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.19□□□□□ -1.74
EPHB3P54753 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
EPHB3P54753 MIR432-201ENST00000606207 94 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 AC004792.1-201ENST00000614523 137 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 CR392039.5-201ENST00000623201 510 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.19□□□□□ -1.74
EPHB3P54753 AC005183.1-201ENST00000603687 1979 ntBASIC4.19□□□□□ -1.74
EPHB3P54753 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
EPHB3P54753 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
EPHB3P54753 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
EPHB3P54753 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
EPHB3P54753 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
EPHB3P54753 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.18□□□□□ -1.74
EPHB3P54753 AL161912.2-201ENST00000565707 3007 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 RNU6-989P-201ENST00000362756 107 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 Y_RNA.270-201ENST00000364693 104 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
EPHB3P54753 RNU6-662P-201ENST00000384253 104 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 MIR30B-201ENST00000384850 88 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 SNORD73A-201ENST00000386062 65 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 MIR670-201ENST00000390142 98 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 MIR1251-201ENST00000408552 70 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 RNU6-121P-201ENST00000410525 99 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 RNU6-1203P-201ENST00000410703 110 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 RNU2-25P-201ENST00000411041 191 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 SNORA57.3-201ENST00000411095 141 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 RPL21P38-201ENST00000418090 167 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 AC099677.1-201ENST00000420575 175 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 MYL8P-204ENST00000431574 518 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 AL133547.1-201ENST00000448546 220 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 NDUFS5P3-201ENST00000450668 321 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 RNU6-953P-201ENST00000459154 107 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 AC091153.1-201ENST00000466297 402 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.18□□□□□ -1.74
EPHB3P54753 ACA59.1-201ENST00000515966 143 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.18□□□□□ -1.74
EPHB3P54753 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.18□□□□□ -1.74
EPHB3P54753 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.18□□□□□ -1.74
EPHB3P54753 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.18□□□□□ -1.74
EPHB3P54753 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.18□□□□□ -1.74
EPHB3P54753 AC004584.2-201ENST00000570407 410 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.18□□□□□ -1.74
EPHB3P54753 LRRC37A5P-203ENST00000580181 585 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 RPS29P30-201ENST00000600975 111 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 AC012669.1-201ENST00000603209 283 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 AC006065.5-201ENST00000623427 349 ntBASIC4.18□□□□□ -1.74
EPHB3P54753 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.18□□□□□ -1.74
EPHB3P54753 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
EPHB3P54753 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
EPHB3P54753 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
EPHB3P54753 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
EPHB3P54753 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EPHB3P54753 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
EPHB3P54753 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
EPHB3P54753 Y_RNA.274-201ENST00000364714 101 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 Y_RNA.471-201ENST00000384312 102 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 RNU6-790P-201ENST00000384479 105 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 MIR124-3-201ENST00000384866 87 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 PCNPP3-201ENST00000393579 471 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 SNORA3.3-201ENST00000408712 125 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 RN7SKP156-201ENST00000410308 342 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 AP000275.1-201ENST00000411943 390 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 UBE2D3P2-201ENST00000424409 445 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
EPHB3P54753 RPEP5-201ENST00000441137 268 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.17□□□□□ -1.74
EPHB3P54753 AL590399.6-201ENST00000446396 307 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.17□□□□□ -1.74
EPHB3P54753 SNORD108-201ENST00000459332 71 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 RNU7-169P-201ENST00000459456 61 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 RPL21P11-201ENST00000461458 483 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 SNORA31.6-201ENST00000516241 130 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 RNU6-390P-201ENST00000516259 103 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 RN7SKP258-201ENST00000517151 304 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.17□□□□□ -1.74
EPHB3P54753 MIR5692A1-201ENST00000580523 69 ntBASIC4.17□□□□□ -1.74
EPHB3P54753 MIR4273-201ENST00000582824 84 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms