Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RPL21P7-201ENST00000557463 483 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 MIR4423-201ENST00000580922 80 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.771-201ENST00000598668 102 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.67□□□□□ -1.66
NFKB1P19838 AC024940.4-201ENST00000605507 246 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 RPL23AP88-201ENST00000605759 454 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 Y_RNA.789-201ENST00000622480 102 ntBASIC4.67□□□□□ -1.66
NFKB1P19838 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NFKB1P19838 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NFKB1P19838 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.67□□□□□ -1.66
NFKB1P19838 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NFKB1P19838 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NFKB1P19838 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NFKB1P19838 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NFKB1P19838 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.66□□□□□ -1.66
NFKB1P19838 AC007390.2-201ENST00000606229 3803 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NFKB1P19838 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.66□□□□□ -1.66
NFKB1P19838 ZNF137P-201ENST00000456718 1920 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NFKB1P19838 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NFKB1P19838 AC021146.4-201ENST00000309229 279 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 SNORA25.1-201ENST00000362326 128 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 SNORD115-32-201ENST00000364079 82 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 SNORA71.2-201ENST00000364941 134 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 RNU6-843P-201ENST00000384454 104 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 RNU6-918P-201ENST00000391219 106 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 RNU4-30P-201ENST00000410245 143 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 RNU6-394P-201ENST00000410735 107 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 EIF4A1P3-201ENST00000411521 244 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.66□□□□□ -1.66
NFKB1P19838 RPL23AP75-201ENST00000491601 451 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 AC139453.3-201ENST00000493276 369 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 MLLT10P2-201ENST00000506434 249 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 Y_RNA.679-201ENST00000516416 91 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 RNU6-572P-201ENST00000516724 80 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 AK6P2-201ENST00000549020 471 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 AL078605.1-201ENST00000603529 500 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.66□□□□□ -1.66
NFKB1P19838 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 RMST_6.1-201ENST00000611980 203 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.66□□□□□ -1.66
NFKB1P19838 AC099669.2-201ENST00000616549 437 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.66□□□□□ -1.66
NFKB1P19838 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NFKB1P19838 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NFKB1P19838 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NFKB1P19838 AC008725.1-201ENST00000605123 2263 ntBASIC4.66□□□□□ -1.66
NFKB1P19838 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NFKB1P19838 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NFKB1P19838 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NFKB1P19838 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NFKB1P19838 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
NFKB1P19838 RNU6-879P-201ENST00000364328 108 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 RNA5SP151-201ENST00000365632 117 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.65□□□□□ -1.67
NFKB1P19838 RNU6-968P-201ENST00000384076 107 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 RNU1-139P-201ENST00000391307 165 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 RNU5A-5P-201ENST00000411054 116 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 Y_RNA.625-201ENST00000411256 107 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.65□□□□□ -1.67
NFKB1P19838 RPL17P36-201ENST00000420302 549 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 NDUFB4P7-201ENST00000423198 363 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 ANP32BP2-201ENST00000454525 545 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 Y_RNA.638-201ENST00000459374 113 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 AC108145.1-201ENST00000503770 153 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 MRPS18CP4-201ENST00000535821 231 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 AC027288.2-201ENST00000553028 243 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.65□□□□□ -1.67
NFKB1P19838 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.65□□□□□ -1.67
NFKB1P19838 MIR3921-201ENST00000577308 85 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 MIR4480-201ENST00000582492 71 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 AC091178.1-203ENST00000584586 279 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 MIR6748-201ENST00000610433 71 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 AC027309.3-201ENST00000623419 351 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 SCARNA4-202ENST00000625402 129 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
NFKB1P19838 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
NFKB1P19838 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
NFKB1P19838 AL359693.1-201ENST00000614959 2407 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 AC009541.1-201ENST00000438279 2662 ntBASIC4.65□□□□□ -1.67
NFKB1P19838 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
NFKB1P19838 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NFKB1P19838 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NFKB1P19838 ASNSP1-201ENST00000518311 1939 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NFKB1P19838 RNU6-105P-201ENST00000363909 104 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 RNU6-21P-201ENST00000384710 107 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 RNA5SP213-201ENST00000391031 106 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 MIR298-201ENST00000401212 88 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.64□□□□□ -1.67
NFKB1P19838 CYP4F29P-201ENST00000420685 446 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.64□□□□□ -1.67
NFKB1P19838 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.64□□□□□ -1.67
NFKB1P19838 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.64□□□□□ -1.67
NFKB1P19838 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.64□□□□□ -1.67
NFKB1P19838 AP001324.2-201ENST00000461163 319 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 AC073901.1-201ENST00000462471 408 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 RNA5SP360-201ENST00000516555 118 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms