Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 HMGB1P24-202ENST00000615653 685 ntBASIC4.02□□□□□ -1.77
KLF4O43474 SNX18P1Y-201ENST00000616231 511 ntBASIC4.02□□□□□ -1.77
KLF4O43474 AP005019.3-201ENST00000620418 560 ntBASIC4.02□□□□□ -1.77
KLF4O43474 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KLF4O43474 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KLF4O43474 AC009541.1-201ENST00000438279 2662 ntBASIC4.02□□□□□ -1.77
KLF4O43474 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KLF4O43474 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
KLF4O43474 UBE3AP2-201ENST00000429033 2259 ntBASIC4.01□□□□□ -1.77
KLF4O43474 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.01□□□□□ -1.77
KLF4O43474 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
KLF4O43474 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
KLF4O43474 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
KLF4O43474 Y_RNA.48-201ENST00000362710 103 ntBASIC4.01□□□□□ -1.77
KLF4O43474 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
KLF4O43474 MIR1911-201ENST00000410783 80 ntBASIC4.01□□□□□ -1.77
KLF4O43474 AC011933.1-201ENST00000413334 321 ntBASIC4.01□□□□□ -1.77
KLF4O43474 MCFD2P1-201ENST00000417812 300 ntBASIC4.01□□□□□ -1.77
KLF4O43474 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.01□□□□□ -1.77
KLF4O43474 AC243428.1-201ENST00000421099 264 ntBASIC4.01□□□□□ -1.77
KLF4O43474 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
KLF4O43474 FGF7P3-201ENST00000454645 303 ntBASIC4.01□□□□□ -1.77
KLF4O43474 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.01□□□□□ -1.77
KLF4O43474 AC093840.1-201ENST00000511599 336 ntBASIC4.01□□□□□ -1.77
KLF4O43474 RNU7-4P-201ENST00000516961 62 ntBASIC4.01□□□□□ -1.77
KLF4O43474 ACA59.2-201ENST00000517061 156 ntBASIC4.01□□□□□ -1.77
KLF4O43474 SNORA31.21-201ENST00000517180 77 ntBASIC4.01□□□□□ -1.77
KLF4O43474 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.01□□□□□ -1.77
KLF4O43474 AC020634.1-201ENST00000608701 549 ntBASIC4.01□□□□□ -1.77
KLF4O43474 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.01□□□□□ -1.77
KLF4O43474 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.01□□□□□ -1.77
KLF4O43474 AC097372.5-201ENST00000623665 376 ntBASIC4.01□□□□□ -1.77
KLF4O43474 MIR6830-201ENST00000636015 70 ntBASIC4.01□□□□□ -1.77
KLF4O43474 AC241585.2-209ENST00000638217 143 ntBASIC4.01□□□□□ -1.77
KLF4O43474 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
KLF4O43474 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
KLF4O43474 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.01□□□□□ -1.77
KLF4O43474 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
KLF4O43474 AC032011.1-201ENST00000611703 1549 ntBASIC4□□□□□ -1.77
KLF4O43474 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KLF4O43474 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4□□□□□ -1.77
KLF4O43474 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
KLF4O43474 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
KLF4O43474 Y_RNA.39-201ENST00000362620 98 ntBASIC4□□□□□ -1.77
KLF4O43474 Y_RNA.123-201ENST00000363338 102 ntBASIC4□□□□□ -1.77
KLF4O43474 Y_RNA.145-201ENST00000363527 102 ntBASIC4□□□□□ -1.77
KLF4O43474 Y_RNA.364-201ENST00000365532 101 ntBASIC4□□□□□ -1.77
KLF4O43474 RNU6-1032P-201ENST00000384100 107 ntBASIC4□□□□□ -1.77
KLF4O43474 RNU6-784P-201ENST00000384330 106 ntBASIC4□□□□□ -1.77
KLF4O43474 Y_RNA.533-201ENST00000384596 114 ntBASIC4□□□□□ -1.77
KLF4O43474 RNU6-19P-201ENST00000384718 107 ntBASIC4□□□□□ -1.77
KLF4O43474 RNU4-6P-201ENST00000410804 122 ntBASIC4□□□□□ -1.77
KLF4O43474 AC096649.2-201ENST00000416186 393 ntBASIC4□□□□□ -1.77
KLF4O43474 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4□□□□□ -1.77
KLF4O43474 EIF1AXP1-201ENST00000419267 435 ntBASIC4□□□□□ -1.77
KLF4O43474 AC007098.1-201ENST00000420122 367 ntBASIC4□□□□□ -1.77
KLF4O43474 RPL7P2-201ENST00000427639 268 ntBASIC4□□□□□ -1.77
KLF4O43474 SETP5-201ENST00000437270 562 ntBASIC4□□□□□ -1.77
KLF4O43474 AC011276.1-201ENST00000469688 323 ntBASIC4□□□□□ -1.77
KLF4O43474 AC015911.1-201ENST00000495111 156 ntBASIC4□□□□□ -1.77
KLF4O43474 AC097462.2-201ENST00000504623 481 ntBASIC4□□□□□ -1.77
KLF4O43474 RN7SKP122-201ENST00000515923 296 ntBASIC4□□□□□ -1.77
KLF4O43474 SNORA70.14-201ENST00000516205 110 ntBASIC4□□□□□ -1.77
KLF4O43474 RNU6-711P-201ENST00000517255 106 ntBASIC4□□□□□ -1.77
KLF4O43474 IFITM8P-201ENST00000522529 394 ntBASIC4□□□□□ -1.77
KLF4O43474 AP000827.1-201ENST00000527814 258 ntBASIC4□□□□□ -1.77
KLF4O43474 TRAV8-5-201ENST00000537369 341 ntBASIC4□□□□□ -1.77
KLF4O43474 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4□□□□□ -1.77
KLF4O43474 MIR5696-201ENST00000578474 85 ntBASIC4□□□□□ -1.77
KLF4O43474 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4□□□□□ -1.77
KLF4O43474 AC015813.4-201ENST00000610469 179 ntBASIC4□□□□□ -1.77
KLF4O43474 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4□□□□□ -1.77
KLF4O43474 AL138825.1-201ENST00000618587 192 ntBASIC4□□□□□ -1.77
KLF4O43474 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4□□□□□ -1.77
KLF4O43474 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
KLF4O43474 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
KLF4O43474 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KLF4O43474 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.99□□□□□ -1.77
KLF4O43474 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.99□□□□□ -1.77
KLF4O43474 RNU1-105P-201ENST00000363470 161 ntBASIC3.99□□□□□ -1.77
KLF4O43474 U3.6-201ENST00000363622 211 ntBASIC3.99□□□□□ -1.77
KLF4O43474 Y_RNA.314-201ENST00000365114 102 ntBASIC3.99□□□□□ -1.77
KLF4O43474 RNU6-843P-201ENST00000384454 104 ntBASIC3.99□□□□□ -1.77
KLF4O43474 RNU6-738P-201ENST00000384531 106 ntBASIC3.99□□□□□ -1.77
KLF4O43474 MIR625-201ENST00000385047 85 ntBASIC3.99□□□□□ -1.77
KLF4O43474 RNA5SP252-201ENST00000391131 119 ntBASIC3.99□□□□□ -1.77
KLF4O43474 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.99□□□□□ -1.77
KLF4O43474 RNA5SP44-201ENST00000410446 133 ntBASIC3.99□□□□□ -1.77
KLF4O43474 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.99□□□□□ -1.77
KLF4O43474 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.99□□□□□ -1.77
KLF4O43474 AL356387.2-201ENST00000422272 243 ntBASIC3.99□□□□□ -1.77
KLF4O43474 RPL7AP25-201ENST00000423357 805 ntBASIC3.99□□□□□ -1.77
KLF4O43474 MTCYBP10-201ENST00000424905 650 ntBASIC3.99□□□□□ -1.77
KLF4O43474 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KLF4O43474 PTGES3P4-201ENST00000426243 356 ntBASIC3.99□□□□□ -1.77
KLF4O43474 RPS12P10-201ENST00000427031 377 ntBASIC3.99□□□□□ -1.77
KLF4O43474 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.99□□□□□ -1.77
KLF4O43474 AL031183.1-201ENST00000457667 207 ntBASIC3.99□□□□□ -1.77
KLF4O43474 RN7SKP210-201ENST00000459176 261 ntBASIC3.99□□□□□ -1.77
KLF4O43474 RPS29P27-201ENST00000463711 170 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms