Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 AC243829.7-201ENST00000633081 225 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 MIR1244-3-201ENST00000635744 85 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 MIR1244-2-201ENST00000636449 85 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 MIR1244-4-202ENST00000636813 85 ntBASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM88BA6NKF7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.61
TMEM88BA6NKF7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.96□□□□□ -1.61
TMEM88BA6NKF7 AP001642.1-201ENST00000624727 2117 ntBASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 MT-TG-201ENST00000387429 68 ntBASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 MIR3668-201ENST00000582138 75 ntBASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 MIR7975-201ENST00000619350 68 ntBASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.96□□□□□ -1.62
TMEM88BA6NKF7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 MIR133A2-201ENST00000347538 102 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 RNU6-105P-201ENST00000363909 104 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 RNU6-1035P-201ENST00000384477 107 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 Y_RNA.551-201ENST00000384661 102 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 AP000275.1-201ENST00000411943 390 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 CTSL3P-202ENST00000412179 788 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 RPS29P4-201ENST00000414733 161 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 AC114482.1-201ENST00000418010 247 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 EIF4HP2-201ENST00000424380 563 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 RPL23AP46-201ENST00000438548 490 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 AC073910.1-201ENST00000445047 438 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 AC010265.1-201ENST00000513509 211 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 RNU6-1143P-201ENST00000516125 104 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 SNORA43.2-201ENST00000516652 128 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 H3F3AP1-201ENST00000559984 334 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 U3.45-201ENST00000607547 219 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 U2.21-201ENST00000637295 81 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 U6.104-201ENST00000637979 90 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 MTND5P7-201ENST00000413558 1798 ntBASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TMEM88BA6NKF7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 RNU6-778P-201ENST00000363269 103 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 Y_RNA.123-201ENST00000363338 102 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 U3.6-201ENST00000363622 211 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 Y_RNA.188-201ENST00000363952 111 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 U8.11-201ENST00000384699 133 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 U8.12-201ENST00000384701 133 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 RPL21P17-201ENST00000397467 475 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 U8.18-201ENST00000459285 133 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 AC010655.3-201ENST00000478818 450 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 RN7SL293P-201ENST00000481765 281 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 AF213884.1-201ENST00000488102 463 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 RNU7-175P-201ENST00000515915 61 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 CYCSP30-201ENST00000546447 172 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 MYL12BP1-201ENST00000569826 507 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 CYCSP40-201ENST00000575927 294 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 AL390123.1-201ENST00000603216 237 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 AL110115.1-201ENST00000614396 364 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 MAPK10-372ENST00000641954 3413 ntBASIC4.94□□□□□ -1.62
TMEM88BA6NKF7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMEM88BA6NKF7 Z95331.1-201ENST00000623075 23112 ntBASIC4.93□□□□□ -1.62
TMEM88BA6NKF7 Y_RNA.106-201ENST00000363189 100 ntBASIC4.93□□□□□ -1.62
TMEM88BA6NKF7 RNU6-884P-201ENST00000363889 107 ntBASIC4.93□□□□□ -1.62
TMEM88BA6NKF7 Y_RNA.210-201ENST00000364161 110 ntBASIC4.93□□□□□ -1.62
TMEM88BA6NKF7 Y_RNA.276-201ENST00000364732 109 ntBASIC4.93□□□□□ -1.62
TMEM88BA6NKF7 SNORA51.11-201ENST00000384442 131 ntBASIC4.93□□□□□ -1.62
TMEM88BA6NKF7 SNORA1.3-201ENST00000384676 136 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms