Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 HSPE1P6-201ENST00000479457 291 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 AC027575.1-201ENST00000481064 460 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 MTND5P5-201ENST00000503764 376 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.79□□□□□ -1.8
PNKPQ96T60 AC009901.1-201ENST00000506703 541 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 AC074250.1-201ENST00000511117 192 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.79□□□□□ -1.8
PNKPQ96T60 AC138761.3-201ENST00000579993 334 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.79□□□□□ -1.8
PNKPQ96T60 SNRPGP15-201ENST00000600149 222 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 BDH2P1-201ENST00000602288 736 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.79□□□□□ -1.8
PNKPQ96T60 MIR7975-201ENST00000619350 68 ntBASIC3.79□□□□□ -1.8
PNKPQ96T60 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PNKPQ96T60 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PNKPQ96T60 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PNKPQ96T60 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
PNKPQ96T60 RNU5A-1-201ENST00000362698 116 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 Y_RNA.212-201ENST00000364177 102 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 U3.15-201ENST00000365398 212 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PNKPQ96T60 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PNKPQ96T60 SNORD116-11-201ENST00000383882 92 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 RNU6-434P-201ENST00000384376 107 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 RNU6-817P-201ENST00000391083 104 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 RN7SKP158-201ENST00000410453 326 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 RNA5SP293-201ENST00000410527 113 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 RNU6-370P-201ENST00000411008 104 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 RPS12P24-201ENST00000412619 387 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 RPL37P10-201ENST00000412884 288 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.78□□□□□ -1.8
PNKPQ96T60 BX842559.1-201ENST00000419615 532 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.78□□□□□ -1.8
PNKPQ96T60 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.78□□□□□ -1.8
PNKPQ96T60 AL159987.2-201ENST00000432754 307 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 AC010285.1-201ENST00000470580 392 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.78□□□□□ -1.8
PNKPQ96T60 AC021205.2-201ENST00000480069 347 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 AC108860.1-201ENST00000484521 383 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 AC096576.1-201ENST00000489014 359 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 MLLT10P2-201ENST00000506434 249 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 AC005741.1-201ENST00000511094 432 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 RPL39P5-202ENST00000512505 151 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 APOOP3-201ENST00000536787 586 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 AL355836.1-201ENST00000555951 870 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 MIR5692C1-201ENST00000585309 91 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 AC023043.2-201ENST00000589678 1026 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.78□□□□□ -1.8
PNKPQ96T60 MIR15A-201ENST00000607334 83 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.78□□□□□ -1.8
PNKPQ96T60 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
PNKPQ96T60 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PNKPQ96T60 AC090337.1-201ENST00000579651 2074 ntBASIC3.78□□□□□ -1.8
PNKPQ96T60 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PNKPQ96T60 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PNKPQ96T60 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PNKPQ96T60 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PNKPQ96T60 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PNKPQ96T60 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PNKPQ96T60 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PNKPQ96T60 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PNKPQ96T60 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PNKPQ96T60 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PNKPQ96T60 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PNKPQ96T60 AC004925.1-201ENST00000624256 2706 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PNKPQ96T60 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PNKPQ96T60 RNU6-335P-201ENST00000364563 113 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 SNORD42.2-201ENST00000365570 69 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PNKPQ96T60 RNU6-474P-201ENST00000384243 107 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 RNY4P36-201ENST00000391116 96 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 PTMAP5-201ENST00000393073 333 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.77□□□□□ -1.81
PNKPQ96T60 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.77□□□□□ -1.81
PNKPQ96T60 RPLP0P7-201ENST00000416050 667 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.77□□□□□ -1.81
PNKPQ96T60 HMGB1P27-201ENST00000431429 603 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 AC073063.1-201ENST00000434352 607 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.77□□□□□ -1.81
PNKPQ96T60 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.77□□□□□ -1.81
PNKPQ96T60 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.77□□□□□ -1.81
PNKPQ96T60 AC087884.1-201ENST00000469738 328 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 AC117503.1-201ENST00000472241 394 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 AL049874.1-201ENST00000489560 388 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 RPS27P27-201ENST00000498779 255 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.77□□□□□ -1.81
PNKPQ96T60 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.77□□□□□ -1.81
PNKPQ96T60 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PNKPQ96T60 RNU6-1170P-201ENST00000515974 106 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 SNORA14.1-201ENST00000516113 141 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.77□□□□□ -1.81
PNKPQ96T60 AC026333.2-201ENST00000542164 106 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.77□□□□□ -1.81
PNKPQ96T60 MTCO3P13-201ENST00000577757 781 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 MIR3941-201ENST00000582572 103 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 AC080078.3-201ENST00000605407 463 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 AC124303.1-201ENST00000605703 360 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 AL138726.1-201ENST00000614873 333 ntBASIC3.77□□□□□ -1.81
PNKPQ96T60 FAM157A-202ENST00000615155 405 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms