Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.08□□□□□ -1.76
KRT40Q6A162 RPL7P28-201ENST00000437739 740 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AC104058.1-201ENST00000448028 297 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 ZNF519P1-201ENST00000449011 1626 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
KRT40Q6A162 RN7SL594P-201ENST00000470590 287 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AC090096.1-201ENST00000489168 390 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.08□□□□□ -1.76
KRT40Q6A162 HIGD1AP13-201ENST00000509878 289 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 TBCAP3-201ENST00000512475 312 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.08□□□□□ -1.76
KRT40Q6A162 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.08□□□□□ -1.76
KRT40Q6A162 RNU2-69P-201ENST00000516061 100 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 RNU2-27P-201ENST00000516185 142 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.08□□□□□ -1.76
KRT40Q6A162 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRT40Q6A162 MTCO3P23-201ENST00000561363 289 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AC007151.1-201ENST00000572774 483 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AC005951.2-201ENST00000576282 495 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AC138761.3-201ENST00000579993 334 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.08□□□□□ -1.76
KRT40Q6A162 XIAPP1-201ENST00000603162 600 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AL670379.4-201ENST00000605279 254 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AC010680.4-201ENST00000605334 543 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AL355802.3-201ENST00000607571 545 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AC007998.5-201ENST00000622938 237 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
KRT40Q6A162 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KRT40Q6A162 AC090337.1-201ENST00000579651 2074 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRT40Q6A162 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRT40Q6A162 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRT40Q6A162 RNU6-715P-201ENST00000365204 103 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRT40Q6A162 SNORA22B-201ENST00000383876 138 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 Y_RNA.399-201ENST00000383955 105 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 RNU6-308P-201ENST00000390957 107 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
KRT40Q6A162 AC005300.1-201ENST00000428401 373 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.07□□□□□ -1.76
KRT40Q6A162 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.07□□□□□ -1.76
KRT40Q6A162 FABP5P13-201ENST00000452144 328 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.07□□□□□ -1.76
KRT40Q6A162 MTCO3P10-201ENST00000455912 772 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AC130509.1-201ENST00000464158 433 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AC087884.1-201ENST00000469738 328 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AC117503.1-201ENST00000472241 394 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AC008526.1-201ENST00000509149 338 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 RNU6-390P-201ENST00000516259 103 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 Y_RNA.689-201ENST00000516589 107 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.07□□□□□ -1.76
KRT40Q6A162 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.07□□□□□ -1.76
KRT40Q6A162 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.07□□□□□ -1.76
KRT40Q6A162 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.07□□□□□ -1.76
KRT40Q6A162 MIR5692C1-201ENST00000585309 91 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AC006504.6-201ENST00000590142 199 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.07□□□□□ -1.76
KRT40Q6A162 AL158032.1-201ENST00000605401 106 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AC098657.3-201ENST00000620434 263 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 uc_338.22-201ENST00000622722 187 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AP003355.3-201ENST00000623465 114 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.07□□□□□ -1.76
KRT40Q6A162 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.07□□□□□ -1.76
KRT40Q6A162 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
KRT40Q6A162 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KRT40Q6A162 OTUD4P1-201ENST00000237841 3067 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.06□□□□□ -1.76
KRT40Q6A162 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
KRT40Q6A162 MIR423-201ENST00000362201 94 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 Y_RNA.187-201ENST00000363918 113 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 Y_RNA.197-201ENST00000364004 102 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 RNU6-882P-201ENST00000391025 103 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 CISD1P1-201ENST00000393907 327 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 AL139039.1-201ENST00000401900 692 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 AL139397.2-201ENST00000404529 772 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.06□□□□□ -1.76
KRT40Q6A162 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.06□□□□□ -1.76
KRT40Q6A162 NEFMP1-201ENST00000443423 1006 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.06□□□□□ -1.76
KRT40Q6A162 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.06□□□□□ -1.76
KRT40Q6A162 SNRPGP5-201ENST00000456003 220 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 RPL21P10-201ENST00000463521 490 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 RPL21P103-201ENST00000479921 488 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 RPL32P34-201ENST00000486380 400 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 RPS27P27-201ENST00000498779 255 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.06□□□□□ -1.76
KRT40Q6A162 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.06□□□□□ -1.76
KRT40Q6A162 SNORA31.3-201ENST00000516029 96 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 RNU6-1069P-201ENST00000516612 133 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 RNU4-60P-201ENST00000517239 135 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.06□□□□□ -1.76
KRT40Q6A162 OR4H12P-201ENST00000556269 907 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.06□□□□□ -1.76
KRT40Q6A162 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.06□□□□□ -1.76
KRT40Q6A162 AL138889.2-201ENST00000603883 242 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 AP000942.4-201ENST00000604811 241 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 HMGN2P28-201ENST00000606102 262 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.06□□□□□ -1.76
KRT40Q6A162 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms