Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 AC233981.2-201ENST00000611524 1614 ntBASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 Y_RNA.493-201ENST00000384422 102 ntBASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 UBE2V1P9-201ENST00000414760 368 ntBASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 AC234064.1-201ENST00000436312 247 ntBASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 USP9YP34-201ENST00000453983 808 ntBASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 CYP3A52P-201ENST00000563326 91 ntBASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 AC093838.1-201ENST00000613014 469 ntBASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
SMIM27A0A1W2PRY6 RBBP8P1-201ENST00000449447 1844 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AL161781.1-201ENST00000354277 403 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 RNU6-349P-201ENST00000362402 107 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 RNU6-374P-201ENST00000364146 108 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 RNU6-317P-201ENST00000384031 107 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 SNORA25-201ENST00000384384 134 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 RNU1-119P-201ENST00000391122 165 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AL592045.1-201ENST00000429867 352 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 ARL5AP3-201ENST00000439327 386 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AC027119.1-201ENST00000440877 241 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 CKS1BP2-201ENST00000497342 240 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AC067942.3-201ENST00000512025 362 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 RNU6-496P-201ENST00000516145 99 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 SNORA31.6-201ENST00000516241 130 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 RNA5SP102-201ENST00000516865 106 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 NRON-201ENST00000517270 370 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AC090079.2-201ENST00000575289 768 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 FAM106DP-201ENST00000586416 501 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AL138963.2-201ENST00000605137 226 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AC007620.3-201ENST00000608131 497 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AC017083.3-201ENST00000609955 700 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AC083806.3-201ENST00000614016 455 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AC093913.1-201ENST00000614178 329 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 OR4G3P-201ENST00000633500 913 ntBASIC0.04□□□□□ -2.4
SMIM27A0A1W2PRY6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 RNU6-945P-201ENST00000383947 107 ntBASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 RNU6-1197P-201ENST00000391183 107 ntBASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 RPL23AP32-201ENST00000395315 459 ntBASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 MTCYBP7-201ENST00000419540 1134 ntBASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 AC012497.1-201ENST00000429392 575 ntBASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 AL034418.1-201ENST00000448675 860 ntBASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 AC105313.1-201ENST00000509121 353 ntBASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 RN7SKP49-201ENST00000516675 260 ntBASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 OR5AK1P-201ENST00000524837 922 ntBASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 MIR8065-201ENST00000620577 100 ntBASIC0.03□□□□□ -2.4
SMIM27A0A1W2PRY6 NSRP1P1-201ENST00000444067 1693 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 RNU6-1249P-201ENST00000363237 111 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 RNU6-1035P-201ENST00000384477 107 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 TATDN1P1-201ENST00000414123 891 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AC099548.1-201ENST00000421443 426 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 VN1R42P-201ENST00000424651 344 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 MTCO2P12-201ENST00000427426 682 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AL353718.1-201ENST00000451028 517 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 RN7SL429P-201ENST00000479090 223 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 RN7SL489P-201ENST00000486185 223 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 RN7SL327P-201ENST00000488659 223 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AC103833.1-201ENST00000517442 172 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AC019176.1-201ENST00000518519 225 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AC018659.1-201ENST00000551083 169 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AC002400.1-201ENST00000569310 726 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AC069114.2-201ENST00000604699 304 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AP001596.2-201ENST00000608410 312 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 MIR7973-1-201ENST00000614683 76 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 AL138726.1-201ENST00000614873 333 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 RN7SL853P-201ENST00000617250 223 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 U1.36-201ENST00000620684 176 ntBASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
SMIM27A0A1W2PRY6 FARSBP1-201ENST00000435808 1778 ntBASIC0.01□□□□□ -2.41
SMIM27A0A1W2PRY6 SNORD1A-201ENST00000364968 72 ntBASIC0.01□□□□□ -2.41
SMIM27A0A1W2PRY6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.01□□□□□ -2.41
SMIM27A0A1W2PRY6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.01□□□□□ -2.41
SMIM27A0A1W2PRY6 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC0.01□□□□□ -2.41
SMIM27A0A1W2PRY6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.01□□□□□ -2.41
SMIM27A0A1W2PRY6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms