Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 SNORA25.17-201ENST00000517184 124 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.84□□□□□ -1.79
PNKPQ96T60 AC135001.1-201ENST00000544546 283 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 MIR3672-201ENST00000584290 82 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 AC007179.3-201ENST00000604976 235 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.84□□□□□ -1.79
PNKPQ96T60 Y_RNA.812-201ENST00000610788 101 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 Y_RNA.784-201ENST00000613803 101 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 Y_RNA.787-201ENST00000616522 101 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 Y_RNA.780-201ENST00000617336 101 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 Y_RNA.801-201ENST00000619005 101 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 AC022149.2-201ENST00000621061 203 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 MIR4275-201ENST00000636486 87 ntBASIC3.84□□□□□ -1.79
PNKPQ96T60 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PNKPQ96T60 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.84□□□□□ -1.8
PNKPQ96T60 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PNKPQ96T60 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.84□□□□□ -1.8
PNKPQ96T60 AC009812.4-201ENST00000569134 1805 ntBASIC3.84□□□□□ -1.8
PNKPQ96T60 HSPA8P4-201ENST00000511877 1920 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 RNU6-254P-201ENST00000363377 107 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 RNA5SP72-201ENST00000364442 117 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 SNORA36C-201ENST00000384289 132 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 SNORD116-29-201ENST00000384516 83 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 MIR183-201ENST00000384958 110 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 EIF4E2P1-201ENST00000393781 255 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 AL590004.1-201ENST00000405321 300 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 MIR548K-201ENST00000408406 116 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 ATP5A1P2-201ENST00000412323 255 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.83□□□□□ -1.8
PNKPQ96T60 VN1R36P-201ENST00000414936 291 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 AF228730.4-201ENST00000421457 183 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 AL353729.1-201ENST00000425044 720 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 MTCO1P39-201ENST00000426148 480 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 RPL23AP83-201ENST00000434984 473 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.83□□□□□ -1.8
PNKPQ96T60 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.83□□□□□ -1.8
PNKPQ96T60 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.83□□□□□ -1.8
PNKPQ96T60 AL136097.1-201ENST00000456945 913 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 RN7SL293P-201ENST00000481765 281 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 KLHL2P1-201ENST00000508691 521 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 HIGD1AP13-201ENST00000509878 289 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.83□□□□□ -1.8
PNKPQ96T60 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.83□□□□□ -1.8
PNKPQ96T60 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.83□□□□□ -1.8
PNKPQ96T60 RNU6-256P-201ENST00000516747 97 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 RNU6-566P-201ENST00000516790 107 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 MIR2276-201ENST00000516886 89 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 RNU6-677P-201ENST00000516914 101 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.83□□□□□ -1.8
PNKPQ96T60 ERHP1-201ENST00000523006 310 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.83□□□□□ -1.8
PNKPQ96T60 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.83□□□□□ -1.8
PNKPQ96T60 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.83□□□□□ -1.8
PNKPQ96T60 AC093249.1-201ENST00000567049 203 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 MIR3922-201ENST00000585192 84 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.83□□□□□ -1.8
PNKPQ96T60 AC174048.1-201ENST00000603389 144 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.83□□□□□ -1.8
PNKPQ96T60 AL359547.2-201ENST00000615810 418 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 AC103705.1-201ENST00000619013 241 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 MTND5P42-201ENST00000637720 498 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 AL732372.2-225ENST00000642124 456 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 MTCO1P12-201ENST00000414273 1543 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PNKPQ96T60 AC068647.1-201ENST00000489539 2265 ntBASIC3.83□□□□□ -1.8
PNKPQ96T60 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PNKPQ96T60 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PNKPQ96T60 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PNKPQ96T60 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PNKPQ96T60 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PNKPQ96T60 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.82□□□□□ -1.8
PNKPQ96T60 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.82□□□□□ -1.8
PNKPQ96T60 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PNKPQ96T60 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PNKPQ96T60 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.82□□□□□ -1.8
PNKPQ96T60 RNU6-715P-201ENST00000365204 103 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 RNA5SP424-201ENST00000390988 115 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 RNA5SP31-201ENST00000411144 127 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 AC017083.1-201ENST00000428093 483 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 SNORD105B-201ENST00000458770 79 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 AC012181.1-201ENST00000479895 423 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.82□□□□□ -1.8
PNKPQ96T60 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.82□□□□□ -1.8
PNKPQ96T60 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.82□□□□□ -1.8
PNKPQ96T60 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.82□□□□□ -1.8
PNKPQ96T60 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.82□□□□□ -1.8
PNKPQ96T60 MIR4790-201ENST00000577799 79 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.82□□□□□ -1.8
PNKPQ96T60 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.82□□□□□ -1.8
PNKPQ96T60 AP001330.4-201ENST00000604350 154 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 AL627309.6-201ENST00000606857 840 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.82□□□□□ -1.8
PNKPQ96T60 AL133215.3-201ENST00000609801 448 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 PART1_1.1-201ENST00000611761 217 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 AC084781.2-201ENST00000615568 161 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 U6.105-201ENST00000637379 88 ntBASIC3.82□□□□□ -1.8
PNKPQ96T60 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PNKPQ96T60 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 227.6 ms