Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.43□□□□□ -1.7
SYN1P17600 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYN1P17600 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
SYN1P17600 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SYN1P17600 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.42□□□□□ -1.7
SYN1P17600 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SYN1P17600 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYN1P17600 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYN1P17600 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYN1P17600 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SYN1P17600 RNU6-545P-201ENST00000362681 104 ntBASIC4.42□□□□□ -1.7
SYN1P17600 Y_RNA.152-201ENST00000363578 100 ntBASIC4.42□□□□□ -1.7
SYN1P17600 SNORD27-201ENST00000363981 72 ntBASIC4.42□□□□□ -1.7
SYN1P17600 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.42□□□□□ -1.7
SYN1P17600 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SYN1P17600 RNU6-1050P-201ENST00000410388 107 ntBASIC4.42□□□□□ -1.7
SYN1P17600 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.42□□□□□ -1.7
SYN1P17600 ARL5AP1-201ENST00000418991 388 ntBASIC4.42□□□□□ -1.7
SYN1P17600 AC137499.1-201ENST00000427602 88 ntBASIC4.42□□□□□ -1.7
SYN1P17600 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.42□□□□□ -1.7
SYN1P17600 AC236972.1-201ENST00000433225 199 ntBASIC4.42□□□□□ -1.7
SYN1P17600 RAC1P7-201ENST00000445367 377 ntBASIC4.42□□□□□ -1.7
SYN1P17600 CHEK2P4-201ENST00000450340 246 ntBASIC4.42□□□□□ -1.7
SYN1P17600 RPL21P93-201ENST00000480465 489 ntBASIC4.42□□□□□ -1.7
SYN1P17600 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.42□□□□□ -1.7
SYN1P17600 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.42□□□□□ -1.7
SYN1P17600 RNU6-475P-201ENST00000516073 104 ntBASIC4.42□□□□□ -1.7
SYN1P17600 RNA5SP384-201ENST00000516615 116 ntBASIC4.42□□□□□ -1.7
SYN1P17600 Y_RNA.715-201ENST00000517082 110 ntBASIC4.42□□□□□ -1.7
SYN1P17600 RNA5SP179-201ENST00000517284 121 ntBASIC4.42□□□□□ -1.7
SYN1P17600 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.42□□□□□ -1.7
SYN1P17600 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.42□□□□□ -1.7
SYN1P17600 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.42□□□□□ -1.7
SYN1P17600 MIR4703-201ENST00000577728 79 ntBASIC4.42□□□□□ -1.7
SYN1P17600 AC091167.4-201ENST00000605079 184 ntBASIC4.42□□□□□ -1.7
SYN1P17600 AC010378.1-201ENST00000619270 362 ntBASIC4.42□□□□□ -1.7
SYN1P17600 AL606534.2-204ENST00000635008 178 ntBASIC4.42□□□□□ -1.7
SYN1P17600 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SYN1P17600 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SYN1P17600 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYN1P17600 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYN1P17600 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.41□□□□□ -1.7
SYN1P17600 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYN1P17600 ZNF72P-201ENST00000425869 1908 ntBASIC4.41□□□□□ -1.7
SYN1P17600 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYN1P17600 SNORA60-201ENST00000362396 134 ntBASIC4.41□□□□□ -1.7
SYN1P17600 RNU6-280P-201ENST00000364145 104 ntBASIC4.41□□□□□ -1.7
SYN1P17600 RNU6-593P-201ENST00000364716 112 ntBASIC4.41□□□□□ -1.7
SYN1P17600 Y_RNA.297-201ENST00000364950 91 ntBASIC4.41□□□□□ -1.7
SYN1P17600 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYN1P17600 Y_RNA.500-201ENST00000384466 111 ntBASIC4.41□□□□□ -1.7
SYN1P17600 SNORA3.3-201ENST00000408712 125 ntBASIC4.41□□□□□ -1.7
SYN1P17600 HMGN1P24-201ENST00000412282 298 ntBASIC4.41□□□□□ -1.7
SYN1P17600 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.41□□□□□ -1.7
SYN1P17600 MRPS18BP2-201ENST00000434310 759 ntBASIC4.41□□□□□ -1.7
SYN1P17600 AL139109.1-201ENST00000455491 297 ntBASIC4.41□□□□□ -1.7
SYN1P17600 AL445433.1-201ENST00000457507 257 ntBASIC4.41□□□□□ -1.7
SYN1P17600 AC004801.2-202ENST00000463559 283 ntBASIC4.41□□□□□ -1.7
SYN1P17600 AC116337.1-201ENST00000509680 687 ntBASIC4.41□□□□□ -1.7
SYN1P17600 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.41□□□□□ -1.7
SYN1P17600 SCARNA16.2-201ENST00000516520 172 ntBASIC4.41□□□□□ -1.7
SYN1P17600 Y_RNA.708-201ENST00000516950 96 ntBASIC4.41□□□□□ -1.7
SYN1P17600 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.41□□□□□ -1.7
SYN1P17600 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.41□□□□□ -1.7
SYN1P17600 AC025627.2-201ENST00000576220 160 ntBASIC4.41□□□□□ -1.7
SYN1P17600 COX6CP3-201ENST00000580869 223 ntBASIC4.41□□□□□ -1.7
SYN1P17600 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYN1P17600 AC006254.3-201ENST00000603353 884 ntBASIC4.41□□□□□ -1.7
SYN1P17600 AC092747.3-201ENST00000603769 301 ntBASIC4.41□□□□□ -1.7
SYN1P17600 AC245517.5-201ENST00000611529 162 ntBASIC4.41□□□□□ -1.7
SYN1P17600 PISRT1.1-201ENST00000616930 107 ntBASIC4.41□□□□□ -1.7
SYN1P17600 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.41□□□□□ -1.7
SYN1P17600 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.41□□□□□ -1.7
SYN1P17600 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.41□□□□□ -1.7
SYN1P17600 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.41□□□□□ -1.7
SYN1P17600 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYN1P17600 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYN1P17600 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SYN1P17600 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
SYN1P17600 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SYN1P17600 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.4□□□□□ -1.7
SYN1P17600 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.4□□□□□ -1.7
SYN1P17600 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.4□□□□□ -1.7
SYN1P17600 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SYN1P17600 Y_RNA.20-201ENST00000362479 113 ntBASIC4.4□□□□□ -1.71
SYN1P17600 RNA5SP267-201ENST00000364893 126 ntBASIC4.4□□□□□ -1.71
SYN1P17600 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
SYN1P17600 Y_RNA.424-201ENST00000384063 103 ntBASIC4.4□□□□□ -1.71
SYN1P17600 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYN1P17600 EIF4E2P1-201ENST00000393781 255 ntBASIC4.4□□□□□ -1.71
SYN1P17600 AL391417.1-201ENST00000404100 426 ntBASIC4.4□□□□□ -1.71
SYN1P17600 RNU6-1140P-201ENST00000410517 106 ntBASIC4.4□□□□□ -1.71
SYN1P17600 RBMY1KP-201ENST00000423480 476 ntBASIC4.4□□□□□ -1.71
SYN1P17600 AL590632.1-201ENST00000424289 371 ntBASIC4.4□□□□□ -1.71
SYN1P17600 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.4□□□□□ -1.71
SYN1P17600 MTCO3P29-201ENST00000432119 779 ntBASIC4.4□□□□□ -1.71
SYN1P17600 RPL23AP89-201ENST00000439324 255 ntBASIC4.4□□□□□ -1.71
SYN1P17600 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.4□□□□□ -1.71
SYN1P17600 AC073910.1-201ENST00000445047 438 ntBASIC4.4□□□□□ -1.71
SYN1P17600 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms