Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU5E-1-201ENST00000362477 120 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 RNU5E-8P-201ENST00000363502 116 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 RNU6-173P-201ENST00000364215 104 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 RNU6-517P-201ENST00000384362 110 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 MIR9-1-201ENST00000385198 89 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AL356057.3-201ENST00000402607 340 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AL162578.1-201ENST00000406202 378 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 FCF1P10-201ENST00000407590 479 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC3O15379 Z92545.1-201ENST00000411782 234 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 UBE2V1P10-201ENST00000414685 269 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC3O15379 SPA17P1-201ENST00000416656 452 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC007283.2-201ENST00000424739 197 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC019097.1-201ENST00000424783 735 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 RPS3AP44-201ENST00000425466 790 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.48□□□□□ -2.01
HDAC3O15379 RPL7L1P10-201ENST00000427790 463 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.48□□□□□ -2.01
HDAC3O15379 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.48□□□□□ -2.01
HDAC3O15379 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.48□□□□□ -2.01
HDAC3O15379 SNRPFP4-201ENST00000456366 242 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.48□□□□□ -2.01
HDAC3O15379 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC3O15379 SRRM1P2-201ENST00000464531 1192 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC3O15379 AC109464.2-201ENST00000510242 943 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC3O15379 SNORA31.18-201ENST00000517043 134 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 RNU6-1220P-201ENST00000517126 108 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.48□□□□□ -2.01
HDAC3O15379 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC3O15379 AC022080.3-201ENST00000544433 482 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC3O15379 MIR3616-201ENST00000584070 92 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC107304.1-201ENST00000604229 296 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC090578.1-201ENST00000604955 591 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.48□□□□□ -2.01
HDAC3O15379 TUG1_1.1-201ENST00000610654 145 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC004852.3-201ENST00000614131 326 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC091834.1-201ENST00000614543 472 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AP001506.1-201ENST00000615444 211 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AL450472.3-201ENST00000615578 367 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 AC010149.2-201ENST00000637608 315 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
HDAC3O15379 AC004944.1-201ENST00000517807 3059 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HDAC3O15379 AL138713.1-201ENST00000624026 2130 ntBASIC2.48□□□□□ -2.01
HDAC3O15379 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HDAC3O15379 AC027514.1-201ENST00000588561 1603 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 MTND5P26-201ENST00000426018 1752 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HDAC3O15379 AL139276.1-201ENST00000311910 1001 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 RNY4P34-201ENST00000364779 95 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 RN7SKP226-201ENST00000364912 300 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 RNU6-259P-201ENST00000383999 107 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HDAC3O15379 RNU2-43P-201ENST00000410306 190 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.47□□□□□ -2.01
HDAC3O15379 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.47□□□□□ -2.01
HDAC3O15379 BEND7P1-201ENST00000422058 457 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.47□□□□□ -2.01
HDAC3O15379 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.47□□□□□ -2.01
HDAC3O15379 AC104850.1-201ENST00000435940 476 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 UBE2V1P13-201ENST00000436983 439 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 DNAJC19P4-201ENST00000440115 345 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.47□□□□□ -2.01
HDAC3O15379 AL121871.1-201ENST00000443413 436 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.47□□□□□ -2.01
HDAC3O15379 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.47□□□□□ -2.01
HDAC3O15379 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.47□□□□□ -2.01
HDAC3O15379 S100A11P2-201ENST00000467589 312 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.47□□□□□ -2.01
HDAC3O15379 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.47□□□□□ -2.01
HDAC3O15379 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.47□□□□□ -2.01
HDAC3O15379 AL117351.2-201ENST00000513571 157 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 RN7SKP298-201ENST00000515950 94 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 RNU6-430P-201ENST00000517078 107 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 RNA5SP402-201ENST00000517148 110 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 MTND1P5-201ENST00000517906 940 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.47□□□□□ -2.01
HDAC3O15379 AC079600.2-201ENST00000550076 130 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 HMGB1P14-201ENST00000557424 591 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AL133153.1-201ENST00000557756 303 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AC027807.1-201ENST00000559921 996 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AMZ2P1-203ENST00000565833 850 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.47□□□□□ -2.01
HDAC3O15379 AC137800.2-201ENST00000574375 120 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.47□□□□□ -2.01
HDAC3O15379 FAM60BP-201ENST00000578364 658 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AC090616.3-201ENST00000582184 217 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AL022099.1-201ENST00000604551 712 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AL161729.4-201ENST00000604650 476 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 MIR6895-201ENST00000613497 78 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.47□□□□□ -2.01
HDAC3O15379 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.47□□□□□ -2.01
HDAC3O15379 AC110994.2-201ENST00000635481 492 ntBASIC2.47□□□□□ -2.01
HDAC3O15379 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms