Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC6.98□□□□□ -1.29
CCDC61Q9Y6R9 AC209154.1-201ENST00000582156 337 ntBASIC6.98□□□□□ -1.29
CCDC61Q9Y6R9 AL670379.3-201ENST00000605040 251 ntBASIC6.98□□□□□ -1.29
CCDC61Q9Y6R9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC61Q9Y6R9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC6.98□□□□□ -1.29
CCDC61Q9Y6R9 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCDC61Q9Y6R9 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.98□□□□□ -1.29
CCDC61Q9Y6R9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC6.98□□□□□ -1.29
CCDC61Q9Y6R9 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
CCDC61Q9Y6R9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 BCORP1-203ENST00000513194 5093 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 SRP72P2-201ENST00000344851 1979 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 AC092079.1-201ENST00000558620 1985 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 RNA5SP505-201ENST00000364748 108 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 MIR329-1-201ENST00000385028 80 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 RPS16P5-201ENST00000406501 404 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 RN7SKP100-201ENST00000411258 284 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 RAB9AP3-201ENST00000412737 573 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 AL158156.1-201ENST00000422509 473 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 AC009238.2-201ENST00000431026 355 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 FHP1-201ENST00000442741 703 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 RPL7AP61-201ENST00000443410 636 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 RAB9AP1-201ENST00000449393 573 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 AC021269.2-201ENST00000532318 330 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 MIR6839-201ENST00000620425 113 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 MIR6844-201ENST00000637122 62 ntBASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC61Q9Y6R9 AL353743.1-202ENST00000431724 1695 ntBASIC6.96□□□□□ -1.29
CCDC61Q9Y6R9 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
CCDC61Q9Y6R9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 MIR10B-201ENST00000385011 110 ntBASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 RNU6-1275P-201ENST00000391087 107 ntBASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 Y_RNA.595-201ENST00000410403 105 ntBASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 AC124916.1-201ENST00000444020 547 ntBASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 RNU6-772P-201ENST00000516042 105 ntBASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 RNU6-927P-201ENST00000516199 100 ntBASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 MIR3121-201ENST00000579680 77 ntBASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC61Q9Y6R9 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 OR9K1P-202ENST00000641111 3217 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 MIR450A1-201ENST00000362262 91 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 RNA5SP191-201ENST00000362585 102 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 RNU6-235P-201ENST00000362644 107 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 RNU6-336P-201ENST00000364891 107 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 U8.6-201ENST00000364939 135 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 RNU6-294P-201ENST00000364999 102 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 SNORA2.3-201ENST00000383920 135 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 SNORD116-21-201ENST00000384507 92 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 SNORA77-201ENST00000408716 125 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 RNU2-43P-201ENST00000410306 190 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 RN7SKP17-201ENST00000411242 351 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 AC119751.6-201ENST00000416712 186 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 MRPS21P2-201ENST00000424704 264 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 RPL7AP49-201ENST00000429522 581 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 AL591438.1-201ENST00000433508 581 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 MRPL48P1-201ENST00000445390 636 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 AP002826.1-201ENST00000608835 315 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 MIR6133-201ENST00000617057 108 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 AC015726.2-201ENST00000620112 122 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 AC048347.1-201ENST00000624621 427 ntBASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC61Q9Y6R9 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CCDC61Q9Y6R9 RNU6-915P-201ENST00000364943 103 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms