Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 CR383656.7-201ENST00000548164 174 ntBASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 AC068135.2-201ENST00000569293 1028 ntBASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 GLUD1P4-201ENST00000590914 418 ntBASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 AC073592.7-201ENST00000623659 507 ntBASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 ZNF209P-201ENST00000593450 2304 ntBASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 AL513185.3-201ENST00000433335 1300 ntBASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SHANK3Q9BYB0 U3.29-201ENST00000391296 212 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 AL139098.1-201ENST00000407291 389 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 RNU2-15P-201ENST00000410692 191 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 OR6K5P-201ENST00000447050 945 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 SEPT14P24-201ENST00000447236 180 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 SUMO2P2-201ENST00000456482 255 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 AC009901.1-201ENST00000506703 541 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 RNU6-334P-201ENST00000517072 102 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 OR5AK1P-201ENST00000524837 922 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 MED28P6-201ENST00000558776 231 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 AC024614.2-201ENST00000577584 372 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 MIR3660-201ENST00000584845 100 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 AP001330.4-201ENST00000604350 154 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 AC106028.5-201ENST00000610332 395 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 AC006329.2-201ENST00000611491 394 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 AC080188.3-201ENST00000624842 748 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 AC087821.2-201ENST00000637086 450 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 MAPK10-266ENST00000641066 6555 ntBASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SHANK3Q9BYB0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 RNU6-799P-201ENST00000363567 107 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 SNORA67.1-201ENST00000364749 141 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 RNU6-468P-201ENST00000384003 109 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 RNY1P4-201ENST00000384595 115 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 MIR217-201ENST00000384817 110 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 MIR506-201ENST00000384998 124 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 MTCO3P1-205ENST00000422088 832 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 TMEM167AP1-201ENST00000423409 219 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 MTCYBP45-201ENST00000435243 565 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AL121871.1-201ENST00000443413 436 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AL589880.1-201ENST00000448271 287 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 RNU5A-7P-201ENST00000515979 116 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC090502.2-201ENST00000549267 280 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC090330.1-201ENST00000588646 764 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC012493.3-201ENST00000604494 112 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC008962.1-201ENST00000605729 304 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AP002826.1-201ENST00000608835 315 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC124016.2-201ENST00000610058 665 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC005332.6-201ENST00000613178 446 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC068880.4-201ENST00000623082 495 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 SUGT1P1-201ENST00000379514 476 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 Y_RNA.433-201ENST00000384089 102 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 MIR517C-201ENST00000385103 95 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC092447.6-201ENST00000414578 210 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 RPL27AP8-201ENST00000424277 446 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC233728.2-201ENST00000425348 757 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AL354695.1-201ENST00000427935 228 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 COX7A2P2-201ENST00000505291 250 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC091860.1-201ENST00000505723 432 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 FABP5P5-201ENST00000515537 406 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 SNORA31.24-201ENST00000517232 57 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 ERHP1-201ENST00000523006 310 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC008127.2-201ENST00000549925 1075 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 MTND4LP25-201ENST00000570218 163 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 MIR3921-201ENST00000577308 85 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC005776.1-201ENST00000603164 290 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC068831.7-201ENST00000616954 363 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AL356094.1-201ENST00000624663 1212 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 AC006026.1-201ENST00000444025 1803 ntBASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SHANK3Q9BYB0 MTCO1P23-201ENST00000415223 1526 ntBASIC1.93□□□□□ -2.1
SHANK3Q9BYB0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SHANK3Q9BYB0 RNU6-37P-201ENST00000362692 107 ntBASIC1.93□□□□□ -2.1
SHANK3Q9BYB0 RNU6-11P-201ENST00000364234 107 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms