Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.84□□□□□ -2.27
GAFA1Q96PS6 AL158823.1-201ENST00000418441 478 ntBASIC0.84□□□□□ -2.27
GAFA1Q96PS6 AL009174.1-201ENST00000426577 416 ntBASIC0.84□□□□□ -2.27
GAFA1Q96PS6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.84□□□□□ -2.27
GAFA1Q96PS6 MTCO1P48-201ENST00000448024 1096 ntBASIC0.84□□□□□ -2.27
GAFA1Q96PS6 TOMM22P6-201ENST00000465035 409 ntBASIC0.84□□□□□ -2.27
GAFA1Q96PS6 PCNAP1-201ENST00000505363 709 ntBASIC0.84□□□□□ -2.27
GAFA1Q96PS6 SNORA48.10-201ENST00000516965 160 ntBASIC0.84□□□□□ -2.27
GAFA1Q96PS6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.84□□□□□ -2.27
GAFA1Q96PS6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.84□□□□□ -2.27
GAFA1Q96PS6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.84□□□□□ -2.27
GAFA1Q96PS6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.84□□□□□ -2.27
GAFA1Q96PS6 AC005498.1-201ENST00000592125 465 ntBASIC0.84□□□□□ -2.27
GAFA1Q96PS6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.84□□□□□ -2.27
GAFA1Q96PS6 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.84□□□□□ -2.27
GAFA1Q96PS6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.84□□□□□ -2.27
GAFA1Q96PS6 AL161722.3-201ENST00000605789 2983 ntBASIC0.84□□□□□ -2.28
GAFA1Q96PS6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
GAFA1Q96PS6 AC233981.2-201ENST00000611524 1614 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 RNU6-374P-201ENST00000364146 108 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 Y_RNA.493-201ENST00000384422 102 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
GAFA1Q96PS6 OFD1P18Y-201ENST00000420889 959 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 AC244636.1-201ENST00000421152 228 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.83□□□□□ -2.28
GAFA1Q96PS6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.83□□□□□ -2.28
GAFA1Q96PS6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC0.83□□□□□ -2.28
GAFA1Q96PS6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.83□□□□□ -2.28
GAFA1Q96PS6 AC114801.2-201ENST00000503825 781 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 AC112518.2-201ENST00000508565 425 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.83□□□□□ -2.28
GAFA1Q96PS6 FAM60BP-201ENST00000578364 658 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 AP001485.1-201ENST00000604799 199 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 AC007038.2-201ENST00000608095 740 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.83□□□□□ -2.28
GAFA1Q96PS6 AC008121.3-201ENST00000618726 433 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 AL445493.3-201ENST00000619568 477 ntBASIC0.83□□□□□ -2.28
GAFA1Q96PS6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC0.82□□□□□ -2.28
GAFA1Q96PS6 RNU6-1243P-201ENST00000364028 107 ntBASIC0.82□□□□□ -2.28
GAFA1Q96PS6 RPL21P90-201ENST00000415692 466 ntBASIC0.82□□□□□ -2.28
GAFA1Q96PS6 RPL30P13-201ENST00000418873 348 ntBASIC0.82□□□□□ -2.28
GAFA1Q96PS6 GTF2IP20-201ENST00000431663 360 ntBASIC0.82□□□□□ -2.28
GAFA1Q96PS6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.82□□□□□ -2.28
GAFA1Q96PS6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.82□□□□□ -2.28
GAFA1Q96PS6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.82□□□□□ -2.28
GAFA1Q96PS6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.82□□□□□ -2.28
GAFA1Q96PS6 AL137159.1-201ENST00000452808 512 ntBASIC0.82□□□□□ -2.28
GAFA1Q96PS6 OR52A4P-202ENST00000481634 799 ntBASIC0.82□□□□□ -2.28
GAFA1Q96PS6 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
GAFA1Q96PS6 SCARNA11.3-201ENST00000517276 130 ntBASIC0.82□□□□□ -2.28
GAFA1Q96PS6 AC118273.2-201ENST00000532092 465 ntBASIC0.82□□□□□ -2.28
GAFA1Q96PS6 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.82□□□□□ -2.28
GAFA1Q96PS6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.82□□□□□ -2.28
GAFA1Q96PS6 AP003400.5-201ENST00000624827 617 ntBASIC0.82□□□□□ -2.28
GAFA1Q96PS6 AL133216.2-202ENST00000634512 349 ntBASIC0.82□□□□□ -2.28
GAFA1Q96PS6 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.82□□□□□ -2.28
GAFA1Q96PS6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 RNU6-270P-201ENST00000364131 105 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 MIR150-201ENST00000385048 84 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 RNA5SP465-201ENST00000391195 109 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 AC006548.1-201ENST00000427470 102 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 EZH2P1-201ENST00000431167 291 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 RNU7-23P-201ENST00000459465 62 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 ARL2BPP4-201ENST00000506854 471 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 MRPS33P3-201ENST00000513456 322 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 HMGB1P14-201ENST00000557424 591 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.81□□□□□ -2.28
GAFA1Q96PS6 MTCO2P22-201ENST00000603246 681 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 PRR13P7-201ENST00000605538 430 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 AC103810.8-201ENST00000607347 118 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 CR381572.1-201ENST00000625098 102 ntBASIC0.81□□□□□ -2.28
GAFA1Q96PS6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
GAFA1Q96PS6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
GAFA1Q96PS6 RNU6-1249P-201ENST00000363237 111 ntBASIC0.8□□□□□ -2.28
GAFA1Q96PS6 SNORD114-27-201ENST00000363766 70 ntBASIC0.8□□□□□ -2.28
GAFA1Q96PS6 RNA5SP125-201ENST00000364843 120 ntBASIC0.8□□□□□ -2.28
GAFA1Q96PS6 RNU6-1080P-201ENST00000383982 107 ntBASIC0.8□□□□□ -2.28
GAFA1Q96PS6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.8□□□□□ -2.28
GAFA1Q96PS6 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.8□□□□□ -2.28
GAFA1Q96PS6 AC234781.2-201ENST00000426370 994 ntBASIC0.8□□□□□ -2.28
GAFA1Q96PS6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.8□□□□□ -2.28
GAFA1Q96PS6 DNAJC19P4-201ENST00000440115 345 ntBASIC0.8□□□□□ -2.28
GAFA1Q96PS6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.8□□□□□ -2.28
GAFA1Q96PS6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.8□□□□□ -2.28
GAFA1Q96PS6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.8□□□□□ -2.28
GAFA1Q96PS6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.8□□□□□ -2.28
GAFA1Q96PS6 MED28P6-201ENST00000558776 231 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms