Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RPS23P3-201ENST00000470993 430 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 RPS27AP1-201ENST00000475545 471 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.46□□□□□ -1.7
EPHB3P54753 RNU6-120P-201ENST00000516077 103 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 RNA5SP384-201ENST00000516615 116 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 RNU6-307P-201ENST00000516743 106 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
EPHB3P54753 AC006064.5-201ENST00000541782 248 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.46□□□□□ -1.7
EPHB3P54753 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.46□□□□□ -1.7
EPHB3P54753 MIR1254-2-201ENST00000579553 63 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
EPHB3P54753 AC012603.1-201ENST00000606424 528 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 AC098479.1-201ENST00000609225 154 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.46□□□□□ -1.7
EPHB3P54753 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
EPHB3P54753 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
EPHB3P54753 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EPHB3P54753 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EPHB3P54753 AL672167.1-203ENST00000641299 2975 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
EPHB3P54753 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EPHB3P54753 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
EPHB3P54753 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
EPHB3P54753 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
EPHB3P54753 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
EPHB3P54753 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
EPHB3P54753 MIR372-201ENST00000362225 67 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 SNORD62.1-201ENST00000362541 86 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 RNU1-35P-201ENST00000362782 153 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 Y_RNA.210-201ENST00000364161 110 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 RNU6-1078P-201ENST00000364522 103 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 RNA5SP283-201ENST00000365604 119 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 Y_RNA.424-201ENST00000384063 103 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 Y_RNA.485-201ENST00000384395 102 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 RNU6-713P-201ENST00000384761 107 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 SNORD70.1-201ENST00000391007 85 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 ENSAP1-201ENST00000392855 326 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 MIR1252-201ENST00000408861 65 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.45□□□□□ -1.7
EPHB3P54753 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.45□□□□□ -1.7
EPHB3P54753 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.45□□□□□ -1.7
EPHB3P54753 DYNLT3P2-201ENST00000442517 295 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.45□□□□□ -1.7
EPHB3P54753 PPIAP3-201ENST00000450588 505 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 snoU13.7-201ENST00000459220 104 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 RPS29P19-201ENST00000479709 171 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 RPL23AP55-201ENST00000498163 452 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 RBBP4P6-201ENST00000508098 202 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.45□□□□□ -1.7
EPHB3P54753 RNU6-1332P-201ENST00000516666 104 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 AC091516.1-201ENST00000549191 703 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 AL161713.1-201ENST00000555538 145 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 AC005899.2-201ENST00000584353 90 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 AC067852.4-201ENST00000590314 478 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.45□□□□□ -1.7
EPHB3P54753 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.45□□□□□ -1.7
EPHB3P54753 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.45□□□□□ -1.7
EPHB3P54753 AC137590.2-201ENST00000619709 240 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 AL161637.1-201ENST00000622380 412 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 U2.22-201ENST00000636441 106 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.45□□□□□ -1.7
EPHB3P54753 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.45□□□□□ -1.7
EPHB3P54753 AC233263.6-201ENST00000631132 1963 ntBASIC4.45□□□□□ -1.7
EPHB3P54753 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
EPHB3P54753 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
EPHB3P54753 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.45□□□□□ -1.7
EPHB3P54753 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.45□□□□□ -1.7
EPHB3P54753 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
EPHB3P54753 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
EPHB3P54753 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.44□□□□□ -1.7
EPHB3P54753 AC116667.1-201ENST00000604855 2072 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
EPHB3P54753 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
EPHB3P54753 RNU6-1284P-201ENST00000363701 100 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 RN7SKP280-201ENST00000364196 304 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 RNA5SP130-201ENST00000364431 114 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 RNA5SP513-201ENST00000364648 118 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 Y_RNA.276-201ENST00000364732 109 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 Y_RNA.461-201ENST00000384263 103 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 RNU6-55P-201ENST00000411092 107 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.44□□□□□ -1.7
EPHB3P54753 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.44□□□□□ -1.7
EPHB3P54753 RPS15AP10-201ENST00000432472 382 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 RPL35AP22-201ENST00000436855 335 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 RPL21P2-201ENST00000440049 481 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 AC073910.1-201ENST00000445047 438 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.44□□□□□ -1.7
EPHB3P54753 AL359073.1-201ENST00000448036 403 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 AL162151.2-201ENST00000448875 158 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 SNORD127-201ENST00000458892 86 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.44□□□□□ -1.7
EPHB3P54753 AC117503.1-201ENST00000472241 394 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 TBCAP3-201ENST00000512475 312 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 AC100870.1-201ENST00000522035 505 ntBASIC4.44□□□□□ -1.7
EPHB3P54753 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.44□□□□□ -1.7
EPHB3P54753 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms