Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TMEM88BA6NKF7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 RLIMP1-201ENST00000339626 1680 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 RNU6-1309P-201ENST00000363305 108 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 RNU6-331P-201ENST00000384724 107 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 RNU6-1105P-201ENST00000384774 107 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 AL358176.2-201ENST00000425769 204 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 AL158071.1-201ENST00000430315 461 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 SNRPEP4-201ENST00000435815 279 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 AC116655.1-201ENST00000508324 901 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 HMGN1P11-201ENST00000508668 303 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 RNU1-86P-201ENST00000516108 154 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 RNU6-764P-201ENST00000516396 105 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 RNU1-107P-201ENST00000516617 154 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 IFITM8P-201ENST00000522529 394 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 TRAV28-201ENST00000557548 323 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 HSPE1P5-201ENST00000561489 272 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 AC104260.2-201ENST00000623551 3497 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 MARK2P15-201ENST00000432204 2186 ntBASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TMEM88BA6NKF7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 MIR1302-3-201ENST00000408128 138 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 Y_RNA.623-201ENST00000411128 95 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AL133396.1-201ENST00000432048 687 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AL160004.2-201ENST00000432935 350 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AC011816.1-201ENST00000441346 546 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 U8.21-201ENST00000459536 136 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 RPL21P104-201ENST00000464143 478 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 RPL31P13-201ENST00000484151 370 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AC110768.1-201ENST00000509222 400 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AC005921.1-201ENST00000510589 286 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 Y_RNA.721-201ENST00000517207 102 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AC136777.2-201ENST00000522979 358 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 MIR5685-201ENST00000579080 79 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AC005255.1-201ENST00000593748 216 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AC090132.2-201ENST00000615881 347 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 AL450345.1-202ENST00000605741 3881 ntBASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TMEM88BA6NKF7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 RNU6-50P-201ENST00000362356 103 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 RNY1P14-201ENST00000384426 108 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 RNU2-68P-201ENST00000410878 191 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 RNU2-71P-201ENST00000411395 189 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AC096664.2-201ENST00000411843 406 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 RPL21P23-201ENST00000446654 460 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 S100A11P1-201ENST00000477525 312 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 KC877373.1-201ENST00000479066 408 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AC069499.1-201ENST00000489433 509 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 RN7SL691P-201ENST00000494487 301 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AC114801.2-201ENST00000503825 781 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 RNA5SP384-201ENST00000516615 116 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AC109479.2-201ENST00000517842 174 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AL117187.1-201ENST00000555482 181 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AC106900.2-201ENST00000604994 317 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AC006023.2-201ENST00000609916 167 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AC007485.1-201ENST00000616755 206 ntBASIC5.26□□□□□ -1.57
TMEM88BA6NKF7 AL138721.1-201ENST00000616756 179 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms