Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC092325.1-201ENST00000566449 554 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 MIR544B-201ENST00000582372 78 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 UBL5P2-201ENST00000583788 219 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC004067.1-201ENST00000608733 700 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC073534.2-201ENST00000620377 381 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC091903.1-201ENST00000624322 454 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 SEPT14P19-203ENST00000633205 211 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC099654.13-201ENST00000639774 207 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 OR5H6-203ENST00000642105 978 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AL355596.1-201ENST00000565399 3996 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.38□□□□□ -1.87
DDX43Q9NXZ2 AC011460.1-201ENST00000636268 1834 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 Y_RNA.88-201ENST00000363029 99 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 RNU5F-7P-201ENST00000363696 115 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 RNU6-1078P-201ENST00000364522 103 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 SNORA7.4-201ENST00000384249 137 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 RNU6-769P-201ENST00000384407 104 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 U8.14-201ENST00000390843 143 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 RNU1-101P-201ENST00000391171 127 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AL354719.1-201ENST00000406535 843 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 RN7SKP266-201ENST00000410232 287 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 PPP1R11P2-201ENST00000423543 382 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AL139415.2-201ENST00000431968 163 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AL596276.1-201ENST00000434465 418 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 LSM1P1-201ENST00000438629 273 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AL353572.1-201ENST00000442490 417 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AL033528.1-201ENST00000453780 140 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 SNRPFP4-201ENST00000456366 242 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC116353.2-201ENST00000505332 712 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AP003497.1-201ENST00000528472 562 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC013828.2-201ENST00000532487 235 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC068587.4-201ENST00000533893 186 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AL022154.1-201ENST00000604698 785 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 OR5AK4P-201ENST00000635912 903 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AL079305.1-201ENST00000623159 3008 ntBASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DDX43Q9NXZ2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 MIR128-1-201ENST00000384921 82 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 SNORA48.2-201ENST00000390926 124 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 RNU6-1197P-201ENST00000391183 107 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 Y_RNA.598-201ENST00000410480 95 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 USP9YP13-201ENST00000417797 480 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC108734.1-201ENST00000439549 399 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC112653.1-201ENST00000443851 386 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 USP9YP12-201ENST00000450481 570 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 HSPE1P6-201ENST00000479457 291 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC022878.1-201ENST00000530684 149 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC124947.2-202ENST00000552735 133 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 PRELID3BP8-201ENST00000604148 295 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC112191.3-201ENST00000604371 277 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AL161729.4-201ENST00000604650 476 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC090578.1-201ENST00000604955 591 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms