Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EPHB3P54753 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
EPHB3P54753 AC074029.4-201ENST00000624796 1859 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EPHB3P54753 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
EPHB3P54753 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EPHB3P54753 Y_RNA.106-201ENST00000363189 100 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 RNU6-1243P-201ENST00000364028 107 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 SNORA37-201ENST00000384504 129 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 RNU2-23P-201ENST00000410545 195 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 RNA5SP107-201ENST00000411358 122 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 PGBD4P6-201ENST00000421501 610 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 AL590632.1-201ENST00000424289 371 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 RPL23AP46-201ENST00000438548 490 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 OSTCP8-201ENST00000445117 448 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.48□□□□□ -1.69
EPHB3P54753 DEFB109F-201ENST00000491870 277 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 AC131281.1-201ENST00000522984 164 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.48□□□□□ -1.69
EPHB3P54753 AL133271.1-201ENST00000538229 291 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.48□□□□□ -1.69
EPHB3P54753 AC106785.1-201ENST00000565935 262 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 RPL23AP97-201ENST00000568955 471 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 AC008521.1-201ENST00000587471 187 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.48□□□□□ -1.69
EPHB3P54753 AC009570.1-201ENST00000609599 745 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 U2.17-201ENST00000611454 95 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 AL606534.2-204ENST00000635008 178 ntBASIC4.48□□□□□ -1.69
EPHB3P54753 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
EPHB3P54753 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
EPHB3P54753 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EPHB3P54753 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.48□□□□□ -1.69
EPHB3P54753 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
EPHB3P54753 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
EPHB3P54753 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EPHB3P54753 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EPHB3P54753 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EPHB3P54753 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
EPHB3P54753 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
EPHB3P54753 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
EPHB3P54753 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.47□□□□□ -1.69
EPHB3P54753 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 RNU1-20P-201ENST00000363314 162 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 Y_RNA.350-201ENST00000365409 98 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
EPHB3P54753 SNORA16.2-201ENST00000390991 127 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 PPIAP31-201ENST00000405422 495 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 RN7SKP27-201ENST00000410684 333 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 RNU2-15P-201ENST00000410692 191 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 Z99755.1-201ENST00000414048 380 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 AL356095.1-201ENST00000417217 199 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.47□□□□□ -1.69
EPHB3P54753 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.47□□□□□ -1.69
EPHB3P54753 RPS17P13-201ENST00000448974 407 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.47□□□□□ -1.69
EPHB3P54753 RNU7-167P-201ENST00000459160 62 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 AC026801.1-201ENST00000497178 464 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 HMGB3P17-201ENST00000504195 649 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 COX7A2P2-201ENST00000505291 250 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 AC009901.1-201ENST00000506703 541 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.47□□□□□ -1.69
EPHB3P54753 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.47□□□□□ -1.69
EPHB3P54753 Y_RNA.680-201ENST00000516441 93 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 SCARNA16.2-201ENST00000516520 172 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.47□□□□□ -1.69
EPHB3P54753 RANP3-201ENST00000530970 276 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.47□□□□□ -1.69
EPHB3P54753 AC124068.1-201ENST00000563131 678 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 AC106782.4-201ENST00000568264 210 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 AC011494.1-201ENST00000596454 237 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 Z98751.3-201ENST00000604447 521 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 MIR6867-201ENST00000610636 67 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 SAGE4P-201ENST00000442271 3381 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 MTCO1P24-201ENST00000515438 1558 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
EPHB3P54753 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
EPHB3P54753 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
EPHB3P54753 AP001273.1-201ENST00000624493 3152 ntBASIC4.47□□□□□ -1.69
EPHB3P54753 IQCB2P-201ENST00000401788 1633 ntBASIC4.46□□□□□ -1.69
EPHB3P54753 AC126323.6-202ENST00000568092 3511 ntBASIC4.46□□□□□ -1.69
EPHB3P54753 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
EPHB3P54753 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EPHB3P54753 Y_RNA.39-201ENST00000362620 98 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 Y_RNA.117-201ENST00000363294 101 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 SNORA41-201ENST00000384675 132 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 RNU6-95P-201ENST00000384697 107 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 RPL21P1-201ENST00000399532 476 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 MIR1911-201ENST00000410783 80 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 AC009237.10-201ENST00000414112 510 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 HMGB1P9-201ENST00000429856 646 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 AL117339.2-201ENST00000430475 180 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 AC099799.1-201ENST00000439809 192 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 NOTCH2P1-201ENST00000443481 624 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 AC005008.1-201ENST00000456151 612 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 RNU6-1132P-201ENST00000459214 107 ntBASIC4.46□□□□□ -1.7
EPHB3P54753 AC104472.2-201ENST00000469035 601 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 190.4 ms