Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RPS15AP27-201ENST00000449183 343 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
EPHB3P54753 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.55□□□□□ -1.68
EPHB3P54753 PCNPP5-201ENST00000452246 481 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
EPHB3P54753 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 AC104806.1-201ENST00000508720 308 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
EPHB3P54753 Y_RNA.670-201ENST00000516255 105 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 RNA5SP315-201ENST00000516340 116 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 RNA5SP312-201ENST00000517068 116 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.55□□□□□ -1.68
EPHB3P54753 AL133153.1-201ENST00000557756 303 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 MIR4504-201ENST00000577413 92 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 AC016727.2-201ENST00000603988 621 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 AL355297.3-201ENST00000604082 446 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 AC018462.2-201ENST00000605375 395 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 RNU6-156P-201ENST00000621869 107 ntBASIC4.55□□□□□ -1.68
EPHB3P54753 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.55□□□□□ -1.68
EPHB3P54753 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.55□□□□□ -1.68
EPHB3P54753 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
EPHB3P54753 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
EPHB3P54753 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
EPHB3P54753 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.54□□□□□ -1.68
EPHB3P54753 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
EPHB3P54753 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
EPHB3P54753 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.54□□□□□ -1.68
EPHB3P54753 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.54□□□□□ -1.68
EPHB3P54753 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
EPHB3P54753 AL672167.1-205ENST00000641112 3080 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 RNA5SP307-201ENST00000362863 116 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 RNU6-1062P-201ENST00000383908 107 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 RNU6-128P-201ENST00000383976 107 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 Y_RNA.428-201ENST00000384078 102 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 Y_RNA.493-201ENST00000384422 102 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 RNU1-13P-201ENST00000384499 162 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
EPHB3P54753 RNA5SP219-201ENST00000390940 113 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 AC097374.1-203ENST00000400783 485 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 Y_RNA.594-201ENST00000410373 140 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 AC069218.2-201ENST00000411665 344 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 AC114491.1-201ENST00000416095 246 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.54□□□□□ -1.68
EPHB3P54753 OR4C10P-201ENST00000434991 931 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.54□□□□□ -1.68
EPHB3P54753 HSFY6P-201ENST00000445573 403 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 SCARNA18-201ENST00000459004 134 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.54□□□□□ -1.68
EPHB3P54753 VN1R104P-201ENST00000505115 1009 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.54□□□□□ -1.68
EPHB3P54753 AC021146.3-201ENST00000511911 260 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 RNU2-53P-201ENST00000516257 147 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 RNU6-406P-201ENST00000516470 107 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 SNORD116.3-201ENST00000517176 78 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.54□□□□□ -1.68
EPHB3P54753 FAM60DP-201ENST00000524174 632 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
EPHB3P54753 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.54□□□□□ -1.68
EPHB3P54753 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.54□□□□□ -1.68
EPHB3P54753 AC090115.3-201ENST00000553218 849 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.54□□□□□ -1.68
EPHB3P54753 AC012443.1-201ENST00000605605 231 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 FAM27D1-201ENST00000612308 341 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 ATP5A1P2-202ENST00000616464 443 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 AC007546.2-201ENST00000623996 360 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 AC112484.5-201ENST00000624189 228 ntBASIC4.54□□□□□ -1.68
EPHB3P54753 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
EPHB3P54753 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
EPHB3P54753 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
EPHB3P54753 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
EPHB3P54753 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
EPHB3P54753 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.53□□□□□ -1.68
EPHB3P54753 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
EPHB3P54753 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
EPHB3P54753 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.53□□□□□ -1.68
EPHB3P54753 ZNF734P-201ENST00000419494 1534 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
EPHB3P54753 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
EPHB3P54753 SPRR2C-201ENST00000290702 219 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 RNU1-14P-201ENST00000362759 152 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 RNU6-960P-201ENST00000364056 120 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 Y_RNA.380-201ENST00000365663 111 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 Y_RNA.396-201ENST00000383949 103 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 RNU6-823P-201ENST00000391042 103 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 RNA5SP36-201ENST00000410197 133 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 RNU6-628P-201ENST00000410675 107 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 BX682237.1-201ENST00000415016 335 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.53□□□□□ -1.68
EPHB3P54753 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.53□□□□□ -1.68
EPHB3P54753 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.53□□□□□ -1.68
EPHB3P54753 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.53□□□□□ -1.68
EPHB3P54753 RPL21P112-201ENST00000434403 463 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.53□□□□□ -1.68
EPHB3P54753 RPL7AP28-201ENST00000464513 571 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 RPL21P8-201ENST00000465083 535 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 AC022795.1-201ENST00000473808 480 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 AC108022.1-201ENST00000493466 478 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 RPS27AP13-201ENST00000498403 237 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms