Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 MTND1P28-201ENST00000435623 950 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 HMGN2P20-201ENST00000437531 273 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 COX6CP12-201ENST00000446748 202 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 RPL23AP35-201ENST00000451906 501 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 RNA5SP269-201ENST00000459032 137 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 CDC42P4-201ENST00000510507 563 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC011352.1-201ENST00000512300 793 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC107934.2-201ENST00000518653 310 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 DEFB131D-201ENST00000526803 184 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC087276.1-201ENST00000529659 480 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 MIR4474-201ENST00000579189 78 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC015917.1-201ENST00000579654 510 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 COX6CP3-201ENST00000580869 223 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC012065.4-201ENST00000602445 679 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC006254.3-201ENST00000603353 884 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 NDUFA8P1-201ENST00000605525 367 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC012360.2-201ENST00000609349 391 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AL442067.2-201ENST00000614033 363 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC013476.2-201ENST00000614456 459 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AL356321.1-201ENST00000621360 228 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 AC027514.1-201ENST00000588561 1603 ntBASIC3.55□□□□□ -1.84
DDX43Q9NXZ2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC118273.1-201ENST00000525324 3006 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 ZNF807-201ENST00000328088 1707 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 SNORA9-201ENST00000384215 133 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 RNY3P10-201ENST00000384764 102 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AL356968.1-201ENST00000416622 474 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 SSXP9-201ENST00000417503 292 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC010975.2-201ENST00000427781 588 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 BX890604.2-201ENST00000427883 474 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AL512649.1-201ENST00000428997 581 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 MTCYBP45-201ENST00000435243 565 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 USP9YP35-201ENST00000435696 412 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC091862.1-201ENST00000438016 1100 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 RPS3AP12-201ENST00000443616 753 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 RAC1P7-201ENST00000445367 377 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC021205.2-201ENST00000480069 347 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 ARL2BPP4-201ENST00000506854 471 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC068657.1-201ENST00000520807 306 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 CYCSP2-201ENST00000558168 301 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC136618.2-201ENST00000575091 400 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 MIR5195-201ENST00000583555 115 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 CKS1BP3-201ENST00000600888 237 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC015871.2-201ENST00000603605 948 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC106900.2-201ENST00000604994 317 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC068276.1-201ENST00000605793 379 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 MIR7112-201ENST00000616126 65 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC025048.6-202ENST00000627667 438 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 PABPC1P9-201ENST00000426076 1612 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 AC017071.1-201ENST00000564407 2204 ntBASIC3.54□□□□□ -1.84
DDX43Q9NXZ2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 AL022578.1-201ENST00000439330 1433 ntBASIC3.53□□□□□ -1.84
DDX43Q9NXZ2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 230.9 ms