Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
EPHB3P54753 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.68□□□□□ -1.66
EPHB3P54753 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
EPHB3P54753 EIF2AP4-201ENST00000424793 1781 ntBASIC4.68□□□□□ -1.66
EPHB3P54753 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
EPHB3P54753 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
EPHB3P54753 OR51H2P-202ENST00000641424 3046 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHB3P54753 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
EPHB3P54753 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHB3P54753 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EPHB3P54753 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
EPHB3P54753 MIR331-201ENST00000362302 94 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 RNU6-328P-201ENST00000390887 106 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 EIF4E2P1-201ENST00000393781 255 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 AL592291.1-201ENST00000403830 352 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 RNU4-6P-201ENST00000410804 122 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHB3P54753 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.67□□□□□ -1.66
EPHB3P54753 RPS27AP12-201ENST00000429552 465 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 RPL36P19-201ENST00000430744 301 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
EPHB3P54753 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.67□□□□□ -1.66
EPHB3P54753 GEMIN8P3-201ENST00000445417 720 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 AL162395.1-201ENST00000457882 422 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 TRBV1-201ENST00000476502 284 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 AC091167.1-201ENST00000492017 396 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 AC020893.1-201ENST00000502452 580 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
EPHB3P54753 RN7SKP21-201ENST00000516503 220 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 RNU7-51P-201ENST00000516560 62 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 RNU6-635P-201ENST00000516651 102 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 RNU6-388P-201ENST00000517012 105 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 RNU6-389P-201ENST00000517048 105 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 DEFB109D-201ENST00000529497 240 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 CYCSP29-201ENST00000533731 318 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 AC113195.1-201ENST00000579952 141 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 AC091178.1-203ENST00000584586 279 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 NF1P5-201ENST00000588287 448 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 AC100812.1-201ENST00000607622 580 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 AL031666.3-201ENST00000609320 1006 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 AL445567.2-201ENST00000618935 498 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
EPHB3P54753 AC011155.2-201ENST00000623202 216 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.67□□□□□ -1.66
EPHB3P54753 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
EPHB3P54753 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
EPHB3P54753 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
EPHB3P54753 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHB3P54753 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.67□□□□□ -1.66
EPHB3P54753 AL138713.1-201ENST00000624026 2130 ntBASIC4.67□□□□□ -1.66
EPHB3P54753 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
EPHB3P54753 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
EPHB3P54753 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EPHB3P54753 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
EPHB3P54753 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
EPHB3P54753 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EPHB3P54753 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EPHB3P54753 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
EPHB3P54753 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
EPHB3P54753 AC139769.1-204ENST00000472297 1931 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 ASNSP1-201ENST00000518311 1939 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
EPHB3P54753 RNA5SP479-201ENST00000364858 117 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
EPHB3P54753 SNORD116-11-201ENST00000383882 92 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 RNU6-26P-201ENST00000383985 107 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 SNORA75B-201ENST00000384053 137 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 RNU6-890P-201ENST00000384121 107 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 RPS26P8-201ENST00000393490 348 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 MIR1193-201ENST00000408109 78 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 SNORA11F-201ENST00000408237 128 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 POLHP1-201ENST00000411806 470 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AC068533.1-201ENST00000418542 415 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AL669831.1-202ENST00000428504 417 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.66□□□□□ -1.66
EPHB3P54753 TDGF1P1-201ENST00000445734 527 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AL031584.1-201ENST00000447169 754 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 RPS24P6-201ENST00000452670 400 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AC004801.2-202ENST00000463559 283 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AC010683.1-201ENST00000473673 378 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 RN7SL41P-201ENST00000476144 297 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AC104564.1-201ENST00000493028 407 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.66□□□□□ -1.66
EPHB3P54753 AC093853.1-201ENST00000515689 483 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 RNU2-10P-201ENST00000516375 211 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EPHB3P54753 HMGB1P41-201ENST00000520234 440 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 MRPL49P2-201ENST00000521066 465 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.66□□□□□ -1.66
EPHB3P54753 AC007224.1-201ENST00000564410 144 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.66□□□□□ -1.66
EPHB3P54753 HMGB2P1-201ENST00000591146 634 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AL512605.2-201ENST00000592972 256 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AC079587.1-201ENST00000603846 277 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AC107871.2-201ENST00000612894 502 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 FAM157A-202ENST00000615155 405 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.66□□□□□ -1.66
EPHB3P54753 MIR3653-201ENST00000625572 110 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms