Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NFKB1P19838 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.19□□□□□ -1.58
NFKB1P19838 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.19□□□□□ -1.58
NFKB1P19838 AC007225.2-201ENST00000562529 256 ntBASIC5.19□□□□□ -1.58
NFKB1P19838 AC114947.2-201ENST00000565748 2125 ntBASIC5.19□□□□□ -1.58
NFKB1P19838 AC009852.2-201ENST00000567898 485 ntBASIC5.19□□□□□ -1.58
NFKB1P19838 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.19□□□□□ -1.58
NFKB1P19838 RPS29P30-201ENST00000600975 111 ntBASIC5.19□□□□□ -1.58
NFKB1P19838 MIR15A-201ENST00000607334 83 ntBASIC5.19□□□□□ -1.58
NFKB1P19838 AL031601.2-202ENST00000622650 282 ntBASIC5.19□□□□□ -1.58
NFKB1P19838 AC138965.3-201ENST00000623875 498 ntBASIC5.19□□□□□ -1.58
NFKB1P19838 AC091903.1-201ENST00000624322 454 ntBASIC5.19□□□□□ -1.58
NFKB1P19838 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.19□□□□□ -1.58
NFKB1P19838 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NFKB1P19838 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NFKB1P19838 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
NFKB1P19838 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NFKB1P19838 SCARNA15-201ENST00000607520 4325 ntBASIC5.19□□□□□ -1.58
NFKB1P19838 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NFKB1P19838 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NFKB1P19838 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.19□□□□□ -1.58
NFKB1P19838 Z95331.1-201ENST00000623075 23112 ntBASIC5.19□□□□□ -1.58
NFKB1P19838 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.19□□□□□ -1.58
NFKB1P19838 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.18□□□□□ -1.58
NFKB1P19838 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.18□□□□□ -1.58
NFKB1P19838 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.18□□□□□ -1.58
NFKB1P19838 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
NFKB1P19838 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NFKB1P19838 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.18□□□□□ -1.58
NFKB1P19838 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NFKB1P19838 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 RNU6-288P-201ENST00000363690 104 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 RN7SKP113-201ENST00000363891 295 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 SNORD27-201ENST00000363981 72 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 RNU6-338P-201ENST00000383888 105 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 RNU6-171P-201ENST00000384354 107 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 Y_RNA.539-201ENST00000384635 107 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 MIR135A2-201ENST00000384854 100 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.18□□□□□ -1.58
NFKB1P19838 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 SDAD1P3-201ENST00000427380 333 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 COX6CP13-201ENST00000428703 226 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.18□□□□□ -1.58
NFKB1P19838 AC004383.1-201ENST00000438135 289 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.18□□□□□ -1.58
NFKB1P19838 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.18□□□□□ -1.58
NFKB1P19838 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.18□□□□□ -1.58
NFKB1P19838 NDUFB1P2-201ENST00000449477 176 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 RPS26P39-201ENST00000469206 341 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.18□□□□□ -1.58
NFKB1P19838 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 AC110792.1-201ENST00000491826 472 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 RNU5B-3P-201ENST00000516601 115 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 RN7SKP258-201ENST00000517151 304 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 AC034114.1-201ENST00000520293 285 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.18□□□□□ -1.58
NFKB1P19838 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.18□□□□□ -1.58
NFKB1P19838 AC004584.2-201ENST00000570407 410 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 AC130289.1-201ENST00000577321 73 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 RN7SL652P-201ENST00000577769 300 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 LRRC37A5P-203ENST00000580181 585 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 OR1M4P-201ENST00000589199 287 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 MIR1244-1-201ENST00000612829 85 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.18□□□□□ -1.58
NFKB1P19838 MIR1244-3-201ENST00000635744 85 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 MIR1244-2-201ENST00000636449 85 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 MIR1244-4-202ENST00000636813 85 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.18□□□□□ -1.58
NFKB1P19838 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NFKB1P19838 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 AC093591.2-201ENST00000565254 3843 ntBASIC5.18□□□□□ -1.58
NFKB1P19838 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NFKB1P19838 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NFKB1P19838 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.18□□□□□ -1.58
NFKB1P19838 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
NFKB1P19838 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NFKB1P19838 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
NFKB1P19838 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NFKB1P19838 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NFKB1P19838 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NFKB1P19838 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NFKB1P19838 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NFKB1P19838 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NFKB1P19838 Y_RNA.105-201ENST00000363182 111 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 Y_RNA.150-201ENST00000363562 102 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 Y_RNA.183-201ENST00000363882 113 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 RNU6-746P-201ENST00000384112 109 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 Y_RNA.471-201ENST00000384312 102 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 AL109941.1-201ENST00000401925 229 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms