Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtp4Q9ER80 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rtp4Q9ER80 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp4Q9ER80 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp4Q9ER80 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rtp4Q9ER80 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.72■■□□□ 1.07
Rtp4Q9ER80 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rtp4Q9ER80 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rtp4Q9ER80 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtp4Q9ER80 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Rtp4Q9ER80 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rtp4Q9ER80 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtp4Q9ER80 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtp4Q9ER80 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rtp4Q9ER80 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rtp4Q9ER80 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp4Q9ER80 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.69■■□□□ 1.06
Rtp4Q9ER80 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp4Q9ER80 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rtp4Q9ER80 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.69■■□□□ 1.06
Rtp4Q9ER80 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Rtp4Q9ER80 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Rtp4Q9ER80 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rtp4Q9ER80 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rtp4Q9ER80 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rtp4Q9ER80 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.67■■□□□ 1.06
Rtp4Q9ER80 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rtp4Q9ER80 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rtp4Q9ER80 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp4Q9ER80 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rtp4Q9ER80 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtp4Q9ER80 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.65■■□□□ 1.06
Rtp4Q9ER80 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rtp4Q9ER80 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rtp4Q9ER80 Particl-201ENSMUST00000205370 1560 ntBASIC21.64■■□□□ 1.05
Rtp4Q9ER80 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtp4Q9ER80 Gm11175-201ENSMUST00000116172 543 ntBASIC21.63■■□□□ 1.05
Rtp4Q9ER80 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtp4Q9ER80 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtp4Q9ER80 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rtp4Q9ER80 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.63■■□□□ 1.05
Rtp4Q9ER80 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rtp4Q9ER80 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rtp4Q9ER80 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Rtp4Q9ER80 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtp4Q9ER80 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtp4Q9ER80 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtp4Q9ER80 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rtp4Q9ER80 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtp4Q9ER80 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtp4Q9ER80 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtp4Q9ER80 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtp4Q9ER80 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Rtp4Q9ER80 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtp4Q9ER80 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Rtp4Q9ER80 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtp4Q9ER80 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtp4Q9ER80 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rtp4Q9ER80 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rtp4Q9ER80 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtp4Q9ER80 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rtp4Q9ER80 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.56■■□□□ 1.04
Rtp4Q9ER80 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Rtp4Q9ER80 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtp4Q9ER80 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtp4Q9ER80 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rtp4Q9ER80 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rtp4Q9ER80 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtp4Q9ER80 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rtp4Q9ER80 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Rtp4Q9ER80 Gm6311-201ENSMUST00000073790 878 ntBASIC21.54■■□□□ 1.04
Rtp4Q9ER80 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rtp4Q9ER80 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rtp4Q9ER80 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtp4Q9ER80 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.53■■□□□ 1.04
Rtp4Q9ER80 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtp4Q9ER80 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.53■■□□□ 1.04
Rtp4Q9ER80 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtp4Q9ER80 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtp4Q9ER80 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.53■■□□□ 1.04
Rtp4Q9ER80 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rtp4Q9ER80 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rtp4Q9ER80 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rtp4Q9ER80 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.52■■□□□ 1.04
Rtp4Q9ER80 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rtp4Q9ER80 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Rtp4Q9ER80 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtp4Q9ER80 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtp4Q9ER80 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtp4Q9ER80 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.49■■□□□ 1.03
Rtp4Q9ER80 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rtp4Q9ER80 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtp4Q9ER80 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rtp4Q9ER80 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtp4Q9ER80 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
Rtp4Q9ER80 Mir6538-201ENSMUST00000183713 110 ntBASIC21.48■■□□□ 1.03
Rtp4Q9ER80 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rtp4Q9ER80 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rtp4Q9ER80 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rtp4Q9ER80 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms