Protein–RNA interactions for Protein: Q9EPB8

Vmn1r54, Vomeronasal type-1 receptor 54, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r54Q9EPB8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Vmn1r54Q9EPB8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Vmn1r54Q9EPB8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r54Q9EPB8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r54Q9EPB8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r54Q9EPB8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r54Q9EPB8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r54Q9EPB8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vmn1r54Q9EPB8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Vmn1r54Q9EPB8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vmn1r54Q9EPB8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vmn1r54Q9EPB8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vmn1r54Q9EPB8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vmn1r54Q9EPB8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Vmn1r54Q9EPB8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vmn1r54Q9EPB8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vmn1r54Q9EPB8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vmn1r54Q9EPB8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.74■□□□□ 0.59
Vmn1r54Q9EPB8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Vmn1r54Q9EPB8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vmn1r54Q9EPB8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vmn1r54Q9EPB8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vmn1r54Q9EPB8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r54Q9EPB8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vmn1r54Q9EPB8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vmn1r54Q9EPB8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Vmn1r54Q9EPB8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r54Q9EPB8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r54Q9EPB8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Vmn1r54Q9EPB8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Vmn1r54Q9EPB8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r54Q9EPB8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r54Q9EPB8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vmn1r54Q9EPB8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.7■□□□□ 0.58
Vmn1r54Q9EPB8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Vmn1r54Q9EPB8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r54Q9EPB8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r54Q9EPB8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r54Q9EPB8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vmn1r54Q9EPB8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.69■□□□□ 0.58
Vmn1r54Q9EPB8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Vmn1r54Q9EPB8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vmn1r54Q9EPB8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r54Q9EPB8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r54Q9EPB8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r54Q9EPB8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r54Q9EPB8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vmn1r54Q9EPB8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r54Q9EPB8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r54Q9EPB8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r54Q9EPB8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r54Q9EPB8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Vmn1r54Q9EPB8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vmn1r54Q9EPB8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r54Q9EPB8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r54Q9EPB8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r54Q9EPB8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r54Q9EPB8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r54Q9EPB8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r54Q9EPB8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r54Q9EPB8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vmn1r54Q9EPB8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vmn1r54Q9EPB8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r54Q9EPB8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vmn1r54Q9EPB8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Vmn1r54Q9EPB8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.64■□□□□ 0.57
Vmn1r54Q9EPB8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r54Q9EPB8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r54Q9EPB8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r54Q9EPB8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vmn1r54Q9EPB8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r54Q9EPB8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r54Q9EPB8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r54Q9EPB8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vmn1r54Q9EPB8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r54Q9EPB8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r54Q9EPB8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r54Q9EPB8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.62■□□□□ 0.57
Vmn1r54Q9EPB8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vmn1r54Q9EPB8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vmn1r54Q9EPB8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vmn1r54Q9EPB8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r54Q9EPB8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.6■□□□□ 0.57
Vmn1r54Q9EPB8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r54Q9EPB8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r54Q9EPB8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vmn1r54Q9EPB8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vmn1r54Q9EPB8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r54Q9EPB8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r54Q9EPB8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.59■□□□□ 0.57
Vmn1r54Q9EPB8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.59■□□□□ 0.57
Vmn1r54Q9EPB8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r54Q9EPB8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.59■□□□□ 0.57
Vmn1r54Q9EPB8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vmn1r54Q9EPB8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vmn1r54Q9EPB8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Vmn1r54Q9EPB8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.58■□□□□ 0.56
Vmn1r54Q9EPB8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vmn1r54Q9EPB8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Vmn1r54Q9EPB8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms