Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Smim29Q8R043 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim29Q8R043 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim29Q8R043 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim29Q8R043 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smim29Q8R043 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim29Q8R043 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.73□□□□□ -0.05
Smim29Q8R043 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.73□□□□□ -0.05
Smim29Q8R043 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smim29Q8R043 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim29Q8R043 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smim29Q8R043 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Smim29Q8R043 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim29Q8R043 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim29Q8R043 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.71□□□□□ -0.05
Smim29Q8R043 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Smim29Q8R043 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smim29Q8R043 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smim29Q8R043 Il17rd-202ENSMUST00000223942 2186 ntBASIC14.69□□□□□ -0.06
Smim29Q8R043 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smim29Q8R043 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smim29Q8R043 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smim29Q8R043 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Smim29Q8R043 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smim29Q8R043 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smim29Q8R043 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC14.68□□□□□ -0.06
Smim29Q8R043 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smim29Q8R043 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smim29Q8R043 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.67□□□□□ -0.06
Smim29Q8R043 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smim29Q8R043 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smim29Q8R043 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smim29Q8R043 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smim29Q8R043 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim29Q8R043 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Smim29Q8R043 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim29Q8R043 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Smim29Q8R043 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim29Q8R043 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smim29Q8R043 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim29Q8R043 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smim29Q8R043 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smim29Q8R043 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Smim29Q8R043 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim29Q8R043 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smim29Q8R043 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim29Q8R043 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim29Q8R043 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim29Q8R043 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smim29Q8R043 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim29Q8R043 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim29Q8R043 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smim29Q8R043 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim29Q8R043 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Smim29Q8R043 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Smim29Q8R043 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smim29Q8R043 Particl-201ENSMUST00000205370 1560 ntBASIC14.6□□□□□ -0.07
Smim29Q8R043 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim29Q8R043 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.6□□□□□ -0.07
Smim29Q8R043 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Smim29Q8R043 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim29Q8R043 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim29Q8R043 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smim29Q8R043 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.59□□□□□ -0.07
Smim29Q8R043 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smim29Q8R043 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC14.59□□□□□ -0.07
Smim29Q8R043 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smim29Q8R043 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.58□□□□□ -0.08
Smim29Q8R043 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim29Q8R043 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim29Q8R043 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Smim29Q8R043 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim29Q8R043 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim29Q8R043 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smim29Q8R043 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smim29Q8R043 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smim29Q8R043 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Smim29Q8R043 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC14.57□□□□□ -0.08
Smim29Q8R043 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smim29Q8R043 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smim29Q8R043 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smim29Q8R043 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smim29Q8R043 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smim29Q8R043 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smim29Q8R043 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smim29Q8R043 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms