Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Calcoco1Q8CGU1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.96■■□□□ 1.43
Calcoco1Q8CGU1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Calcoco1Q8CGU1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Calcoco1Q8CGU1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Calcoco1Q8CGU1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Calcoco1Q8CGU1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Calcoco1Q8CGU1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Calcoco1Q8CGU1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Calcoco1Q8CGU1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Calcoco1Q8CGU1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Calcoco1Q8CGU1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Calcoco1Q8CGU1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Calcoco1Q8CGU1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Calcoco1Q8CGU1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Calcoco1Q8CGU1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Calcoco1Q8CGU1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Calcoco1Q8CGU1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Calcoco1Q8CGU1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Calcoco1Q8CGU1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Calcoco1Q8CGU1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Calcoco1Q8CGU1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Calcoco1Q8CGU1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Calcoco1Q8CGU1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Calcoco1Q8CGU1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Calcoco1Q8CGU1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Calcoco1Q8CGU1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.9■■□□□ 1.42
Calcoco1Q8CGU1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Calcoco1Q8CGU1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Calcoco1Q8CGU1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Calcoco1Q8CGU1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Calcoco1Q8CGU1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Calcoco1Q8CGU1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.88■■□□□ 1.41
Calcoco1Q8CGU1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Calcoco1Q8CGU1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Calcoco1Q8CGU1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Calcoco1Q8CGU1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Calcoco1Q8CGU1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Calcoco1Q8CGU1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.87■■□□□ 1.41
Calcoco1Q8CGU1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Calcoco1Q8CGU1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Calcoco1Q8CGU1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Calcoco1Q8CGU1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Calcoco1Q8CGU1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Calcoco1Q8CGU1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.85■■□□□ 1.41
Calcoco1Q8CGU1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Calcoco1Q8CGU1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Calcoco1Q8CGU1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.84■■□□□ 1.41
Calcoco1Q8CGU1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Calcoco1Q8CGU1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Calcoco1Q8CGU1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.84■■□□□ 1.41
Calcoco1Q8CGU1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Calcoco1Q8CGU1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Calcoco1Q8CGU1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Calcoco1Q8CGU1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Calcoco1Q8CGU1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Calcoco1Q8CGU1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Calcoco1Q8CGU1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Calcoco1Q8CGU1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Calcoco1Q8CGU1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Calcoco1Q8CGU1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Calcoco1Q8CGU1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Calcoco1Q8CGU1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Calcoco1Q8CGU1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Calcoco1Q8CGU1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.78■■□□□ 1.4
Calcoco1Q8CGU1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Calcoco1Q8CGU1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Calcoco1Q8CGU1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
Calcoco1Q8CGU1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Calcoco1Q8CGU1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Calcoco1Q8CGU1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Calcoco1Q8CGU1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Calcoco1Q8CGU1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Calcoco1Q8CGU1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.75■■□□□ 1.39
Calcoco1Q8CGU1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Calcoco1Q8CGU1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Calcoco1Q8CGU1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Calcoco1Q8CGU1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Calcoco1Q8CGU1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Calcoco1Q8CGU1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Calcoco1Q8CGU1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Calcoco1Q8CGU1 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.73■■□□□ 1.39
Calcoco1Q8CGU1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Calcoco1Q8CGU1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Calcoco1Q8CGU1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Calcoco1Q8CGU1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Calcoco1Q8CGU1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Calcoco1Q8CGU1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Calcoco1Q8CGU1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Calcoco1Q8CGU1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Calcoco1Q8CGU1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Calcoco1Q8CGU1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Calcoco1Q8CGU1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.72■■□□□ 1.39
Calcoco1Q8CGU1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.72■■□□□ 1.39
Calcoco1Q8CGU1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.72■■□□□ 1.39
Calcoco1Q8CGU1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Calcoco1Q8CGU1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Calcoco1Q8CGU1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.39
Calcoco1Q8CGU1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Calcoco1Q8CGU1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms