Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Smc5Q8CG46 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Smc5Q8CG46 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.05■■■□□ 2.24
Smc5Q8CG46 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
Smc5Q8CG46 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
Smc5Q8CG46 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
Smc5Q8CG46 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Smc5Q8CG46 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
Smc5Q8CG46 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Smc5Q8CG46 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Smc5Q8CG46 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Smc5Q8CG46 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Smc5Q8CG46 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC29■■■□□ 2.23
Smc5Q8CG46 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC29■■■□□ 2.23
Smc5Q8CG46 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.99■■■□□ 2.23
Smc5Q8CG46 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.99■■■□□ 2.23
Smc5Q8CG46 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Smc5Q8CG46 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Smc5Q8CG46 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Smc5Q8CG46 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
Smc5Q8CG46 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Smc5Q8CG46 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Smc5Q8CG46 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Smc5Q8CG46 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
Smc5Q8CG46 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Smc5Q8CG46 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Smc5Q8CG46 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Smc5Q8CG46 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Smc5Q8CG46 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.94■■■□□ 2.22
Smc5Q8CG46 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
Smc5Q8CG46 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.93■■■□□ 2.22
Smc5Q8CG46 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Smc5Q8CG46 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Smc5Q8CG46 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Smc5Q8CG46 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
Smc5Q8CG46 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Smc5Q8CG46 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Smc5Q8CG46 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Smc5Q8CG46 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Smc5Q8CG46 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Smc5Q8CG46 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Smc5Q8CG46 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
Smc5Q8CG46 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Smc5Q8CG46 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Smc5Q8CG46 Gm45855-201ENSMUST00000212546 880 ntBASIC28.9■■■□□ 2.22
Smc5Q8CG46 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Smc5Q8CG46 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Smc5Q8CG46 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Smc5Q8CG46 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Smc5Q8CG46 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Smc5Q8CG46 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Smc5Q8CG46 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Smc5Q8CG46 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.88■■■□□ 2.21
Smc5Q8CG46 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Smc5Q8CG46 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Smc5Q8CG46 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Smc5Q8CG46 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Smc5Q8CG46 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.86■■■□□ 2.21
Smc5Q8CG46 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Smc5Q8CG46 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Smc5Q8CG46 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Smc5Q8CG46 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Smc5Q8CG46 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Smc5Q8CG46 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
Smc5Q8CG46 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Smc5Q8CG46 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.84■■■□□ 2.21
Smc5Q8CG46 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Smc5Q8CG46 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC28.83■■■□□ 2.21
Smc5Q8CG46 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Smc5Q8CG46 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Smc5Q8CG46 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Smc5Q8CG46 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC28.83■■■□□ 2.21
Smc5Q8CG46 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Smc5Q8CG46 Gm42699-201ENSMUST00000198104 1657 ntBASIC28.81■■■□□ 2.2
Smc5Q8CG46 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Smc5Q8CG46 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Smc5Q8CG46 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Smc5Q8CG46 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Smc5Q8CG46 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.77■■■□□ 2.2
Smc5Q8CG46 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
Smc5Q8CG46 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Smc5Q8CG46 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Smc5Q8CG46 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
Smc5Q8CG46 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Smc5Q8CG46 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
Smc5Q8CG46 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Smc5Q8CG46 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.73■■■□□ 2.19
Smc5Q8CG46 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Smc5Q8CG46 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Smc5Q8CG46 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
Smc5Q8CG46 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Smc5Q8CG46 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.71■■■□□ 2.19
Smc5Q8CG46 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
Smc5Q8CG46 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
Smc5Q8CG46 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC28.7■■■□□ 2.19
Smc5Q8CG46 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.7■■■□□ 2.18
Smc5Q8CG46 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Smc5Q8CG46 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Smc5Q8CG46 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Smc5Q8CG46 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 304.9 ms