Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc46a2Q8CA03 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc46a2Q8CA03 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc46a2Q8CA03 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.34■■□□□ 1.17
Slc46a2Q8CA03 Particl-201ENSMUST00000205370 1560 ntBASIC22.34■■□□□ 1.17
Slc46a2Q8CA03 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Slc46a2Q8CA03 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Slc46a2Q8CA03 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Slc46a2Q8CA03 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Slc46a2Q8CA03 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Slc46a2Q8CA03 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
Slc46a2Q8CA03 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Slc46a2Q8CA03 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Slc46a2Q8CA03 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Slc46a2Q8CA03 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc46a2Q8CA03 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Slc46a2Q8CA03 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Slc46a2Q8CA03 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Slc46a2Q8CA03 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc46a2Q8CA03 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc46a2Q8CA03 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc46a2Q8CA03 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc46a2Q8CA03 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Slc46a2Q8CA03 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.3■■□□□ 1.16
Slc46a2Q8CA03 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc46a2Q8CA03 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Slc46a2Q8CA03 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Slc46a2Q8CA03 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Slc46a2Q8CA03 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Slc46a2Q8CA03 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Slc46a2Q8CA03 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.28■■□□□ 1.16
Slc46a2Q8CA03 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Slc46a2Q8CA03 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Slc46a2Q8CA03 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Slc46a2Q8CA03 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Slc46a2Q8CA03 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.27■■□□□ 1.16
Slc46a2Q8CA03 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Slc46a2Q8CA03 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Slc46a2Q8CA03 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Slc46a2Q8CA03 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.26■■□□□ 1.15
Slc46a2Q8CA03 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Slc46a2Q8CA03 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Slc46a2Q8CA03 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Slc46a2Q8CA03 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Slc46a2Q8CA03 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.25■■□□□ 1.15
Slc46a2Q8CA03 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Slc46a2Q8CA03 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Slc46a2Q8CA03 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Slc46a2Q8CA03 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Slc46a2Q8CA03 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Slc46a2Q8CA03 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Slc46a2Q8CA03 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Slc46a2Q8CA03 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.22■■□□□ 1.15
Slc46a2Q8CA03 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Slc46a2Q8CA03 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Slc46a2Q8CA03 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Slc46a2Q8CA03 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
Slc46a2Q8CA03 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Slc46a2Q8CA03 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.21■■□□□ 1.15
Slc46a2Q8CA03 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Slc46a2Q8CA03 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Slc46a2Q8CA03 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Slc46a2Q8CA03 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
Slc46a2Q8CA03 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Slc46a2Q8CA03 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Slc46a2Q8CA03 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.18■■□□□ 1.14
Slc46a2Q8CA03 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Slc46a2Q8CA03 Gm30023-201ENSMUST00000197970 889 ntBASIC22.18■■□□□ 1.14
Slc46a2Q8CA03 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Slc46a2Q8CA03 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Slc46a2Q8CA03 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.17■■□□□ 1.14
Slc46a2Q8CA03 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Slc46a2Q8CA03 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.17■■□□□ 1.14
Slc46a2Q8CA03 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Slc46a2Q8CA03 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Slc46a2Q8CA03 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Slc46a2Q8CA03 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Slc46a2Q8CA03 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Slc46a2Q8CA03 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Slc46a2Q8CA03 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Slc46a2Q8CA03 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Slc46a2Q8CA03 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.15■■□□□ 1.14
Slc46a2Q8CA03 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Slc46a2Q8CA03 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc46a2Q8CA03 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Slc46a2Q8CA03 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc46a2Q8CA03 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc46a2Q8CA03 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Slc46a2Q8CA03 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Slc46a2Q8CA03 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.12■■□□□ 1.13
Slc46a2Q8CA03 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Slc46a2Q8CA03 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Slc46a2Q8CA03 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc46a2Q8CA03 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc46a2Q8CA03 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc46a2Q8CA03 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Slc46a2Q8CA03 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Slc46a2Q8CA03 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc46a2Q8CA03 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc46a2Q8CA03 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms