Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 tA(AGC)M2tA(AGC)M2 73 nt6.99□□□□□ -1.29
SSN8P47821 tA(AGC)PtA(AGC)P 73 nt6.99□□□□□ -1.29
SSN8P47821 FLX1YIL134W 936 nt6.99□□□□□ -1.29
SSN8P47821 HIS3YOR202W 663 nt6.99□□□□□ -1.29
SSN8P47821 ECM27YJR106W 2178 nt6.99□□□□□ -1.29
SSN8P47821 YLL058WYLL058W 1728 nt6.98□□□□□ -1.29
SSN8P47821 DAL7YIR031C 1665 nt6.98□□□□□ -1.29
SSN8P47821 RPL12BYDR418W 498 nt6.98□□□□□ -1.29
SSN8P47821 IPL1YPL209C 1104 nt6.98□□□□□ -1.29
SSN8P47821 YFR020WYFR020W 699 nt6.97□□□□□ -1.29
SSN8P47821 YIR035CYIR035C 765 nt6.97□□□□□ -1.29
SSN8P47821 YJL009WYJL009W 327 nt6.97□□□□□ -1.29
SSN8P47821 PPZ2YDR436W 2133 nt6.96□□□□□ -1.3
SSN8P47821 SGF73YGL066W 1974 nt6.96□□□□□ -1.3
SSN8P47821 SKY1YMR216C 2229 nt6.95□□□□□ -1.3
SSN8P47821 CYC3YAL039C 810 nt6.95□□□□□ -1.3
SSN8P47821 MEU1YLR017W 1014 nt6.95□□□□□ -1.3
SSN8P47821 YJR149WYJR149W 1215 nt6.94□□□□□ -1.3
SSN8P47821 BUB2YMR055C 921 nt6.94□□□□□ -1.3
SSN8P47821 TPO1YLL028W 1761 nt6.93□□□□□ -1.3
SSN8P47821 MET13YGL125W 1803 nt6.93□□□□□ -1.3
SSN8P47821 SRP102YKL154W 735 nt6.93□□□□□ -1.3
SSN8P47821 SEN2YLR105C 1134 nt6.93□□□□□ -1.3
SSN8P47821 VMA2YBR127C 1554 nt6.93□□□□□ -1.3
SSN8P47821 PRB1YEL060C 1908 nt6.93□□□□□ -1.3
SSN8P47821 DAL4YIR028W 1908 nt6.93□□□□□ -1.3
SSN8P47821 EMP65YER140W 1671 nt6.93□□□□□ -1.3
SSN8P47821 YLR280CYLR280C 351 nt6.92□□□□□ -1.3
SSN8P47821 YLR460CYLR460C 1131 nt6.92□□□□□ -1.3
SSN8P47821 YBR056WYBR056W 1506 nt6.91□□□□□ -1.3
SSN8P47821 YCR025CYCR025C 411 nt6.91□□□□□ -1.3
SSN8P47821 TIF3YPR163C 1311 nt6.91□□□□□ -1.3
SSN8P47821 YJL064WYJL064W 396 nt6.9□□□□□ -1.3
SSN8P47821 SRF1YDL133W 1314 nt6.89□□□□□ -1.31
SSN8P47821 PAB1YER165W 1734 nt6.89□□□□□ -1.31
SSN8P47821 RSP5YER125W 2430 nt6.89□□□□□ -1.31
SSN8P47821 SEC24YIL109C 2781 nt6.88□□□□□ -1.31
SSN8P47821 ERO1YML130C 1692 nt6.88□□□□□ -1.31
SSN8P47821 RPL2AYFR031C-A 765 nt6.88□□□□□ -1.31
SSN8P47821 QCR6YFR033C 444 nt6.88□□□□□ -1.31
SSN8P47821 CHS7YHR142W 951 nt6.88□□□□□ -1.31
SSN8P47821 YLR030WYLR030W 792 nt6.88□□□□□ -1.31
SSN8P47821 YNR001W-AYNR001W-A 219 nt6.88□□□□□ -1.31
SSN8P47821 RFS1YBR052C 633 nt6.88□□□□□ -1.31
SSN8P47821 TOD6YBL054W 1578 nt6.87□□□□□ -1.31
SSN8P47821 MEP1YGR121C 1479 nt6.87□□□□□ -1.31
SSN8P47821 PAU19YMR325W 375 nt6.87□□□□□ -1.31
SSN8P47821 YNL140CYNL140C 570 nt6.87□□□□□ -1.31
SSN8P47821 NAP1YKR048C 1254 nt6.86□□□□□ -1.31
SSN8P47821 OLA1YBR025C 1185 nt6.86□□□□□ -1.31
SSN8P47821 SER2YGR208W 930 nt6.85□□□□□ -1.31
SSN8P47821 CLN1YMR199W 1641 nt6.84□□□□□ -1.31
SSN8P47821 GLY1YEL046C 1164 nt6.84□□□□□ -1.31
SSN8P47821 HMS2YJR147W 1077 nt6.84□□□□□ -1.31
SSN8P47821 MET22YOL064C 1074 nt6.84□□□□□ -1.31
SSN8P47821 FRE5YOR384W 2085 nt6.84□□□□□ -1.31
SSN8P47821 HTS1YPR033C 1641 nt6.83□□□□□ -1.32
SSN8P47821 MRN1YPL184C 1839 nt6.83□□□□□ -1.32
SSN8P47821 TPK1YJL164C 1194 nt6.83□□□□□ -1.32
SSN8P47821 RNA170RNA170 169 nt6.83□□□□□ -1.32
SSN8P47821 RQC1YDR333C 2172 nt6.83□□□□□ -1.32
SSN8P47821 YBR284WYBR284W 2394 nt6.82□□□□□ -1.32
SSN8P47821 LRO1YNR008W 1986 nt6.81□□□□□ -1.32
SSN8P47821 BUD31YCR063W 474 nt6.81□□□□□ -1.32
SSN8P47821 YGR210CYGR210C 1236 nt6.81□□□□□ -1.32
SSN8P47821 NAS6YGR232W 687 nt6.81□□□□□ -1.32
SSN8P47821 ERP2YAL007C 648 nt6.81□□□□□ -1.32
SSN8P47821 YMR166CYMR166C 1107 nt6.81□□□□□ -1.32
SSN8P47821 OCH1YGL038C 1443 nt6.81□□□□□ -1.32
SSN8P47821 INO1YJL153C 1602 nt6.8□□□□□ -1.32
SSN8P47821 INM1YHR046C 888 nt6.8□□□□□ -1.32
SSN8P47821 EHT1YBR177C 1356 nt6.79□□□□□ -1.32
SSN8P47821 TGA1tA(UGC)A 73 nt6.78□□□□□ -1.32
SSN8P47821 tA(UGC)EtA(UGC)E 73 nt6.78□□□□□ -1.32
SSN8P47821 tA(UGC)GtA(UGC)G 73 nt6.78□□□□□ -1.32
SSN8P47821 tA(UGC)LtA(UGC)L 73 nt6.78□□□□□ -1.32
SSN8P47821 tA(UGC)OtA(UGC)O 73 nt6.78□□□□□ -1.32
SSN8P47821 CAK1YFL029C 1107 nt6.78□□□□□ -1.32
SSN8P47821 PMT1YDL095W 2454 nt6.78□□□□□ -1.32
SSN8P47821 RSC9YML127W 1746 nt6.78□□□□□ -1.32
SSN8P47821 TDA4YJR116W 840 nt6.77□□□□□ -1.33
SSN8P47821 RCF1YML030W 480 nt6.77□□□□□ -1.33
SSN8P47821 YPL108WYPL108W 507 nt6.77□□□□□ -1.33
SSN8P47821 LSP1YPL004C 1026 nt6.76□□□□□ -1.33
SSN8P47821 RHO1YPR165W 630 nt6.76□□□□□ -1.33
SSN8P47821 NOG2YNR053C 1461 nt6.76□□□□□ -1.33
SSN8P47821 TKL2YBR117C 2046 nt6.76□□□□□ -1.33
SSN8P47821 RMD8YFR048W 1989 nt6.75□□□□□ -1.33
SSN8P47821 RRT14YIL127C 621 nt6.75□□□□□ -1.33
SSN8P47821 DIP5YPL265W 1827 nt6.75□□□□□ -1.33
SSN8P47821 SEC23YPR181C 2307 nt6.75□□□□□ -1.33
SSN8P47821 TOS1YBR162C 1368 nt6.74□□□□□ -1.33
SSN8P47821 YGR137WYGR137W 375 nt6.74□□□□□ -1.33
SSN8P47821 PUP1YOR157C 786 nt6.74□□□□□ -1.33
SSN8P47821 THI73YLR004C 1572 nt6.74□□□□□ -1.33
SSN8P47821 HXT2YMR011W 1626 nt6.73□□□□□ -1.33
SSN8P47821 KTR4YBR199W 1395 nt6.73□□□□□ -1.33
SSN8P47821 YCP4YCR004C 744 nt6.73□□□□□ -1.33
SSN8P47821 PUP3YER094C 618 nt6.73□□□□□ -1.33
SSN8P47821 MGM101YJR144W 810 nt6.73□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 78.3 ms