Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CfdP03953 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CfdP03953 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CfdP03953 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CfdP03953 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CfdP03953 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CfdP03953 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CfdP03953 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CfdP03953 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CfdP03953 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CfdP03953 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CfdP03953 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CfdP03953 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CfdP03953 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CfdP03953 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CfdP03953 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CfdP03953 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CfdP03953 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.5■□□□□ 0.71
CfdP03953 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CfdP03953 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CfdP03953 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CfdP03953 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CfdP03953 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CfdP03953 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CfdP03953 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CfdP03953 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CfdP03953 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CfdP03953 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CfdP03953 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CfdP03953 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CfdP03953 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CfdP03953 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.46■□□□□ 0.71
CfdP03953 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CfdP03953 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CfdP03953 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CfdP03953 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CfdP03953 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CfdP03953 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CfdP03953 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.45■□□□□ 0.7
CfdP03953 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CfdP03953 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CfdP03953 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CfdP03953 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CfdP03953 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CfdP03953 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CfdP03953 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CfdP03953 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CfdP03953 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CfdP03953 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CfdP03953 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CfdP03953 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CfdP03953 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CfdP03953 Gm8109-201ENSMUST00000194076 746 ntBASIC19.42■□□□□ 0.7
CfdP03953 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CfdP03953 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CfdP03953 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CfdP03953 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CfdP03953 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CfdP03953 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CfdP03953 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CfdP03953 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CfdP03953 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CfdP03953 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
CfdP03953 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CfdP03953 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CfdP03953 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CfdP03953 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.39■□□□□ 0.69
CfdP03953 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CfdP03953 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CfdP03953 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CfdP03953 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CfdP03953 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CfdP03953 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CfdP03953 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CfdP03953 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CfdP03953 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.36■□□□□ 0.69
CfdP03953 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CfdP03953 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CfdP03953 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CfdP03953 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CfdP03953 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.35■□□□□ 0.69
CfdP03953 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.35■□□□□ 0.69
CfdP03953 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CfdP03953 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CfdP03953 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CfdP03953 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.35■□□□□ 0.69
CfdP03953 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CfdP03953 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CfdP03953 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CfdP03953 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CfdP03953 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CfdP03953 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CfdP03953 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CfdP03953 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CfdP03953 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CfdP03953 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CfdP03953 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CfdP03953 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CfdP03953 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CfdP03953 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms